Selaginella moellendorffii: SELMODRAFT_51668
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Entry
SELMODRAFT_51668 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_51668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_51668
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SELMODRAFT_51668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
NPHP3_N
AAA_18
RNA_helicase
nSTAND3
AAA_2
IstB_IS21
AAA_lid_3
AAA_33
Mg_chelatase
AAA_28
TIP49
NB-ARC
AAA_11
NACHT
Viral_helicase1
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
9645612
NCBI-ProteinID:
XP_002975861
JGI:
51668
UniProt:
D8RXN4
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
FENFGGLEERVLEPIYRCIYRLRNPHSFPRQKSVSGILLHGPPGCGKTLLAYAIANEAEV
PIRKVAPAELSSGAGKLFSTIRSIFADVATLARCVLLLDEIDAVAMKRDAARKDVDSRSL
TQLMTCIDGLNHLWDASRQCAGHVIIVGTTNRLEDIDPALRRSGRLTIEIALNAPDEQAR
KQMLSVLTRDTLIEGSRDFTGVAKRTRGFVAADLFELTQQASFIAEQRRNSSLRSADDKE
PWWKFVNTMKEEPATVMEDYEAAVSQVQGSMTREGFSSRPSVSWEDVGGLNKVVEELKSC
ISRCITPSEMCKKLGVRTSAGFLLHGPPGCGKTLIAKAAASYAEANFISVKGPELLRKYL
GDSEEQVRILFRRARECSPCVICLDEVDSLCPKRGTDGNTAVDRVVNQFLVEMDGLQELN
GVIVIATTNRIEAVDEAFLRPGRLGHHVRIPLPDEEARVSILKALTHKRPLAAGVDLAKL
ATSAQLEGLSGSHLSELV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
tttgagaattttgggggactcgaggagagggtgctggagccgatttaccgctgcatctat
cgtcttcgcaatccgcattcttttcctcgacagaaaagtgtgagcggaattctcttgcac
ggtccgccgggatgtgggaaaactttactggcttacgcgatcgcaaacgaggcagaggtt
ccgattcgcaaagtagcaccagccgagctttcttccggtgcaggtaagttgttttcaact
atcaggtccatcttcgcagatgtggctactcttgcgagatgcgtgttgcttctggacgag
atcgatgcggttgctatgaaacgagatgccgcgaggaaggatgtggatagccgaagcttg
acgcagttgatgacatgcatagacgggctgaatcacttgtgggacgcgagcaggcagtgt
gctggacatgttatcatagtagggacgacaaaccggctggaagatattgatccagctctc
agacgctctggcaggctcaccatagagatcgctctcaatgcacccgacgagcaggccagg
aaacagatgctttcggtgctgactcgcgacacacttatagaaggctcccgggacttcact
ggagtggcgaaaagaaccagaggctttgttgcagcggatcttttcgagctgacacagcag
gcatcattcatagcggaacagcggaggaattcaagccttcgtagtgcagacgacaaagaa
ccgtggtggaagtttgtcaatacgatgaaagaggagccggccactgtgatggaggattat
gaggctgctgtatctcaagttcaaggttctatgacacgggaaggcttttcatctcgtcct
agcgtcagttgggaagacgttggaggtctcaacaaggttgttgaagagctcaagagctgc
atttcaagatgtatcacgccctcggaaatgtgtaagaaactcggagtgcgcacctcggct
ggattcttactgcacgggcctcctggctgtggcaaaacactgattgcaaaggcagcggca
agctatgccgaagcaaacttcataagtgtcaaggggcctgagctattacgcaagtatctt
ggagacagcgaagaacaagtccgtatactctttaggcgcgctcgagagtgcagtccgtgt
gttatctgccttgatgaggtggattctttgtgtccaaaacgagggactgatggaaacacc
gctgtggatcgtgttgtgaaccaatttttggtggagatggatggtttgcaagagttgaat
ggtgtgattgtcattgctactacgaacaggattgaggcagtggacgaggctttccttcgt
ccaggacggcttggccaccatgtccgaattcctcttcccgatgaagaggctcgcgtgtcc
atactgaaagctctcacgcacaagaggcctttggcagctggagttgatctggccaagctc
gcaacatcagctcagctcgaaggcttgagcgggagtcatctctccgagctcgtg
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