Selaginella moellendorffii: SELMODRAFT_53129
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Entry
SELMODRAFT_53129 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_53129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_53129
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_53129
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SELMODRAFT_53129
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SELMODRAFT_53129
PBAF complex
SELMODRAFT_53129
GBAF(ncBAF) complex
SELMODRAFT_53129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
9655963
NCBI-ProteinID:
XP_002973906
JGI:
53129
UniProt:
D8RSG6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
SRDVLLNTLDCFLGWFSWTGIHTLEKRGLPEFFNGKTKMNTPELYMEYRNFLIQKYRENP
EKVLAISDIQDLVVGDLNSVRRIIEFLDHWGLINYHVTTRPGQSYPAWQGTPPKVEENNA
GELHAVPHSVSPLGSLYQFETPTKSTFQTHLDPVAALAETFVSEALASTPGPAVEYHCNA
CSADCSKRRYHCQKQADFDLCPDCYNDGKFGPGMSTSDFIRLDALSDANSDDGGWTDQET
LLLLEALEMFGDNWNEIAEHVATKSKAQCILHFIKMPIEDSFLDDVEASASITAASKHTE
EDGKLAAREDTVFKAIMEASASKDSLSGPDGLIAFADAGNPVMAQVAFLAAMVGPRVAAA
AAQSALAALSEGDPATQLAARATFILDDPATIPLPPSLDRLSSLFQAKPEKKKADESGHQ
NAPSAERIRNAAATALAAAAVKAKLLADQEEREMQRLVASVIENQLKKLETKLKHFGELE
VMLKKEYEHIDRARQKHFAERARLLQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
tctcgcgacgtcttacttaatactttggattgttttctaggatggttttcgtggactggc
attcacactctcgagaagcgtggcctgcccgagtttttcaacgggaagaccaaaatgaac
acgccggagctctacatggagtacaggaactttctcatacagaaataccgggagaatcca
gagaaggttttggcgatctcggacatccaggacttggtggtcggcgatctcaattctgtc
cgacgcatcattgagtttcttgaccactgggggctcatcaactatcacgtaacaacaagg
ccgggacagtcttatcctgcttggcagggaacgcctccaaaggtggaagaaaacaatgcc
ggggagctacatgctgtcccgcattccgtgagccctcttggaagtctgtaccagtttgag
actcctacaaagtctacgttccagactcacttggatcctgtcgctgcgcttgccgaaact
tttgtttcggaagccttggcatcgacaccaggtccggcagtcgagtaccattgcaatgct
tgctctgccgactgctccaagcggcgttatcactgccaaaaacaggcagactttgatttg
tgtccggattgctacaatgatggaaagtttggcccgggcatgtcgacatccgatttcatc
cgattggacgctttgtcggatgctaattccgatgatggtggctggacggaccaagaaact
ctactgctgctcgaggcgttggagatgttcggcgacaactggaacgagattgccgagcat
gtagcgaccaagtcaaaggctcagtgcatacttcacttcataaaaatgcctattgaagac
tcctttctggacgatgtcgaggcttccgcaagcatcactgcggcctcaaagcacaccgag
gaagacggaaagctggcagcaagagaggatacggtcttcaaggccataatggaggcgtca
gcatctaaggactctttatcgggtcccgacggcttgatagctttcgctgacgctggcaat
ccggtaatggcgcaggtcgcctttctcgctgcaatggtcggtcctcgagtcgcagctgct
gctgcacaatctgcattggcggcgctgtccgaaggcgatcctgccacgcaactggccgcc
agagctacttttatcttggatgatcctgccacaattcctcttccaccttcattggacagg
ttgtcatctttattccaagccaagccagagaagaagaaggcagacgagtctggtcatcag
aacgctccttccgcagagcgcatccgtaacgcagccgctacagctcttgcagcggcagcg
gtcaaggcaaagctactggccgaccaagaggagcgggagatgcaacgtctagtggccagt
gtgatcgagaaccagctaaaaaagctcgagacaaagctcaagcattttggtgagctggag
gtcatgctgaaaaaggagtacgagcacattgaccgcgccaggcaaaagcactttgccgag
cgcgctcggttgctacag
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