Selaginella moellendorffii: SELMODRAFT_60165
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Entry
SELMODRAFT_60165 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_60165
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
SELMODRAFT_60165
REST complex
SELMODRAFT_60165
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_60165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
PAH_ZNF598
At4g15545_C
Motif
Other DBs
NCBI-GeneID:
9631981
NCBI-ProteinID:
XP_002970412
JGI:
60165
UniProt:
D8RHJ6
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
RLTPDDALQYLKAVKERFKDDNDKYSEFLEVMKDFKAQRIDTNGVIGKVKELFKGHNKLI
IGFNAFLPRGYEIVLDESPREAPKKQPVEFNQAINFVNKIKNRFQDNEQVYKAFLEILNK
FRKGSKSITEVYQEVASLFGHHPDLLDEFTCFLPESANSSLKSSSHLRKDEKSGASAKPS
QSERMFKKKILVQKEKLLDRDQDRAARSDKERRKAEKERDKEKEREEYDREADMDGARHK
RKSARRADELIRKQFVSASSDCLVSAGASLQRDYAFFEKVKGKLRNRDSYQGLLKVLNLY
NEHIISRAELQSLVSDILGKYPELLDGFNELVIRCANAGEGKEREKDKDKEREKEKDRDR
DRDRERDRDREKERAKDHKSSLHANKEKYMTKPISELDLSSCERCTPSYRLLPKNYPRLL
SSHRTELAKSVLNDSWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESTVAT
AKHVEEIVEKLQDASMESQTRIDDHLSVIDLRCIERIYGDHGLDIIDLMRKSPSVVLPVV
HSRLKQKQEEWSKCRSDMNKVWAEVYSKNYHKSLDHRSFYFKQQDRKSLSAKALFGEIKD
VHARKRKEDDSIIATLTGNRRLLTPHLKFEYSDPSIHNDLFEIMKYSADEVCSSMEQSNK
IMRVWTSFLESMFGVPSRIRGTEDAEEAALQPSKERRSSSGDSTGSGNPDTAPSQALKAD
EFTSASSRAVHGEKKRGILDVTESNTKADHHLGFSKTGFSKKDASIDGNFLPLFFTLTYL
LSPSRARNSYHAKTRCKKDRHRRGEKEEGELSPSPDLDARQTFTGEQGSKDRLVKDLVSK
RADYDEAEGDAEQDAEADDEGDESAHKSSEDSENGSEAGEVSGSESGDPDDASREEHEDH
EDEDEEGDDDHEEKAESDFEGEGMADADDGEAPDRSSMFCKPLAAHYTCCMDSLDSCLFY
GNDMFYILFRLHQAFYERIQSAKTNAAAAEQKWKLVKETDPPNLYEKFVRVLYSLLDGSA
DNNKYEDECRSIIGTQSYVLFTLDKLIFRLVKQLQAIVADETANKLLSLY
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
cgtttaacaccagacgatgcgttgcaatacctcaaagcggtgaaggaaagattcaaagac
gataacgataagtactccgagtttttagaagttatgaaggacttcaaagctcagaggatc
gatactaacggggtcattgggaaagtgaaagagcttttcaagggccacaacaaactgatt
attggcttcaatgcattcttgccgagaggctatgaaatcgttctcgatgaatcgccaagg
gaagctcctaaaaaacagcctgtggagttcaaccaggctatcaattttgtcaacaaaatc
aagaatcgtttccaagacaacgaacaagtgtacaaagcgtttttagagattcttaacaaa
tttcgaaagggatctaaatctatcactgaggtttatcaagaggttgcttccttgtttggc
catcaccctgatctgcttgacgaattcacctgctttcttccggaatctgcaaactcgagt
ttaaagtcgagctcacatcttcgtaaagatgagaaatctggagcatcggcgaaaccttct
caatctgaaaggatgtttaagaagaaaattcttgtgcagaaagagaagctgctggatcgc
gatcaagatcgtgcagcaagatcggataaagaacgcaggaaagccgaaaaggagcgggac
aaggaaaaggagagagaagaatatgatcgagaggcggacatggacggagcccgtcacaag
cgcaaatcagcacgtcgggcagacgaacttatccgcaaacagttcgtttctgcatcctct
gactgcctcgtttccgcaggtgcaagcttgcaaagagattacgctttctttgagaaggtg
aaaggaaaactccgtaatcgcgactcgtaccaaggattgctcaaggttctcaacctttat
aacgagcacattatcagccgagcggaattgcagtcactggtttcggacattttgggcaag
tatccggagctactggacggcttcaacgaactggttattcgatgcgcaaatgccggtgaa
ggaaaggagcgggagaaagacaaagacaaggaaagggaaaaggagaaggatagggataga
gacagggacagggagagagaccgagaccgtgaaaaggaacgagccaaagatcacaagtcg
tccctacatgccaacaaggagaaatacatgaccaagcctatatcggaactcgatctatca
agctgtgagcggtgcactccgagctatcgtttactcccaaagaattatcctcgtctcttg
tcaagtcaccgtactgagctggcgaaatctgttctcaatgatagctgggtctctgttaca
tctggcagcgaggattattctttcaaacatatgcgaagaaaccagtatgaagaaagctta
tttcgctgtgaggatgacaggtttgagctggatatgttgctggaatcaacggtagccacg
gcaaagcatgttgaagagattgttgaaaagcttcaggatgccagcatggaatctcaaact
cgcatcgatgatcacttgtctgttatcgatcttcgttgtattgaaaggatttatggtgac
catggcctcgatatcattgatttgatgcgtaaaagtccatccgttgtgctgcctgtcgtt
cacagccgactaaagcaaaagcaggaggaatggtctaagtgccgctctgatatgaacaaa
gtctgggccgaagtttattccaaaaactatcataaatcccttgaccaccggagcttttac
tttaagcaacaggatcgaaagagcttaagcgcaaaagcgctttttggcgagatcaaagat
gttcatgcgcggaagaggaaggaagacgactctattattgcgacactaacgggaaaccga
aggctcttaaccccgcacttgaagtttgaatactccgatccatccattcacaacgatctc
tttgagattatgaaatactcggctgacgaggtatgcagctcgatggaacaatccaacaag
atcatgcgtgtttggacaagtttcctggaatccatgtttggcgtgccgtcaaggatccgt
ggtacagaagatgcagaagaagctgccctccaaccttcgaaggaacggagatccagttcc
ggcgatagtactggtagtggcaacccggacactgcccccagtcaggcactgaaagctgat
gaatttaccagcgcatccagcagagctgtccacggtgaaaagaagcggggaattctggac
gtcacagagagtaacactaaggccgaccaccaccttggcttttcgaagaccggcttttcc
aagaaggatgcttcgatagacggtaactttcttcctttgttctttactttgacttatctg
ctctctccttccagggcccgaaactcataccacgcaaagactagatgtaagaaggatcgc
cacaggaggggcgagaaggaggaaggtgaactttcaccttctccagacttggatgcgagg
caaaccttcacaggagagcaggggtcgaaggaccggcttgtaaaggacttggtatcaaag
cgggctgattatgacgaagctgaaggagatgccgagcaggatgcagaagcagatgacgaa
ggtgacgaaagtgctcacaagtcaagcgaagacagcgagaatggatcggaggctggcgag
gtctcaggtagcgagtcaggcgatccagatgatgcttcgcgcgaggagcacgaagatcac
gaggatgaagacgaagagggagatgatgaccatgaagagaaggctgaaagtgattttgaa
ggtgaaggcatggctgacgcagacgatggggaagctccagatagatcctccatgttttgc
aagcctttggcggctcattatacttgctgcatggattcgctggacagctgcctgttctat
ggcaacgacatgttttacatcttgtttagactgcatcaggctttctacgagcgaatacag
tccgcaaagacaaacgctgccgcagccgagcagaagtggaagctggttaaagaaaccgat
cctccaaacttgtatgaaaagtttgtgcgggtgttgtatagtcttttggatgggtctgct
gacaacaacaagtacgaagacgagtgcagatcgataattggaacgcaatcctacgttttg
tttacgttggacaagctcatatttcggctcgtgaaacagcttcaagcaattgtagcggac
gaaactgcaaacaagcttctgtccctatac
DBGET
integrated database retrieval system
