Selaginella moellendorffii: SELMODRAFT_60241
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Entry
SELMODRAFT_60241 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_60241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_60241
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_60241
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SELMODRAFT_60241
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
SELMODRAFT_60241
Chromatin remodeling factors
BAF complex
SELMODRAFT_60241
PBAF complex
SELMODRAFT_60241
GBAF(ncBAF) complex
SELMODRAFT_60241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
ResIII
DEAD
HDA2-3
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
9636018
NCBI-ProteinID:
XP_002965951
JGI:
60241
UniProt:
D8R3Z3
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
RYYTLAHAVNEQILRQPSMLRAGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQV
MALIAYLMEFKGNYGPHLIIVPNAVIVNWKSELLRWLPSVSSIFYVGVREDRSRIYSQEV
AALKFNVLVTTYEFIMRDRSKLAKVDWKYIIIDEAQRMKDRESRLARDLDRFRCQRRLLL
TGTPLQNDLHELWSLLNLLLPEVFDNSKAFHDWFSKPFQRDANTVEDDWLETEKKVIVIH
RLHQILEPFMLRRRVEDVEGSLPPKVPVVLKCKMSSFQAAIYDWVKATGTIRLDPADEEE
RVASGNGKRQARAYAPLQNKCMELRKVCNHPYLNYPPHCRLFNENMVRMCGKLWILDRIL
IKLQRSGHRVLLFSTMTKLLDILEDYLQWRGLIYRRIDGTTPLDSRETAIVDFNAPGSQC
FIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQKSEVKVIYMEAVVE
SFTSYQMEDELRNGGSLDVDDDMAGKDRYMGSVESLVRNNIQQHKIDMADEVINAGRFDQ
RTTHEERRMTLEALLHDEERYQESVHDVPTLKEVNRMIARSEEEVELFDQMDEECDWPGE
MVAYDEVPEWLHVGSDEVNAAIKATSKQALKALSRKNFTVIHDHKGLKPARRGRPPFEVK
VPPTEIEDDEDLEEVVVEEESSSGEDEEEGEIRDGSDEEEDDTGRQQQDDADEMDDEAEA
VAESSDEREGSPEPRVELQVVDSKKFGSLAALGSRSNQDLVSRDFDGEDLEEGEIAASGD
SPGDSPSEKDPDEDQIVEPRRKRKRSARHRRKVGVGAGNVPVQGVFPVGFLQTWPGYSEY
ERPDVWSITPRPATFIHTGFANWSSQAASKQVRVNGFQELAEEVAVAEMKETRTVRGGAR
MQDNVQKKCKAVLSKLQGAMNKDGRQVSALLMELPKRHELPDYYKVIDKPIDAKTIEEHL
ERFDYATVLDFAGDVQLMLDNASRYNTHNAEVQADARRLHSLFFQRMGLMFPDVDFNSIK
INIGIRMSGSRSSRKQRQVFAEAGRLTPAAAPPPQQEKEDDGTGSVSRGKDSSSRKKTRP
GDRDRGQDQVTHPADLVICKRKRNSRRK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
aggtactatactctggctcatgcagtgaacgagcaaatattgaggcagccgtcaatgctt
cgggcgggaatattacgtgactatcagctggtcggtcttcaatggatgctttctttgtac
aataacagactaaatggtatccttgccgatgaaatgggattgggaaagactgtacaggtt
atggcgctcattgcatacttgatggagttcaaaggaaattacggaccacatcttattatt
gttcccaacgcagtcatagtgaactggaagagtgagctgctccgatggttgccttccgtg
agctccatattttatgttggtgtaagagaagaccgctctaggatttactcacaggaagtt
gctgcattgaagttcaatgttctagttactacgtacgagtttataatgcgcgacagatca
aaactagcaaaagttgattggaagtatattattatagacgaggctcagcgtatgaaagat
cgagagtcccgtcttgctcgtgacttggatcgttttcgctgtcaaaggcggctgcttcta
accggtacccctctgcaaaacgatctacatgagctgtggtcacttttaaatctactcctt
cctgaagtctttgacaacagtaaagcttttcacgactggttctcaaagccattccaaaga
gatgccaatacagttgaggatgattggcttgaaacggaaaagaaagtcatcgttattcac
cggctgcatcaaatacttgagccctttatgcttagacggcgggttgaagatgtcgagggg
tctcttccgcccaaggtccctgttgttttgaagtgtaaaatgtcatcttttcaagcagca
atatacgactgggtgaaggcaactggtactattcgtctggatccagcagatgaggaagaa
agggtggctagtggcaatggcaagcgacaggccagggcttatgctccgttacagaacaag
tgcatggagctgagaaaagtgtgcaaccatccttatcttaattatcctccacactgtcga
ctcttcaacgagaacatggttcggatgtgtggaaaactttggatacttgataggatattg
atcaagctacagaggtcgggccaccgggttttactcttcagcacaatgacgaagttgcta
gatatcctggaggattacctacagtggcgtggtctgatatatcgacgaattgatgggaca
acccctctggactcccgagaaactgctattgtggacttcaatgcgcctggttcccagtgc
ttcatctttttgctcagcatccgggcagcaggtcgtggtttgaatctccagacagcagat
acagtggttatatacgatcctgatccaaatccaaagaacgaggagcaggctgtagcacga
gctcatcgtatcggacagaagtcagaggtgaaggtgatatacatggaagctgttgtggag
tcgttcaccagctatcaaatggaggacgagctccgaaatggaggttccctggacgttgac
gatgatatggcggggaaggatagatacatggggtccgtagaaagccttgtccggaataat
attcagcagcacaagatagatatggccgatgaagtgatcaatgctggccgtttcgatcag
aggactacacacgaagagcgtcgcatgacgttggaagcgctcttgcatgacgaggagaga
tatcaggagtcggttcacgatgttccaacgttgaaagaagtgaacaggatgattgccagg
agtgaagaagaagtcgagcttttcgatcaaatggacgaagaatgtgactggcctggtgaa
atggttgcatacgacgaggtcccggagtggcttcacgttggctcggacgaggtgaatgca
gctatcaaagctacgtccaagcaggcattaaaggcgttgtcaagaaagaacttcactgtg
atacacgatcacaagggactcaagccggcaagacgaggtcgacctccatttgaggtgaag
gttccgcctacagaaatagaggacgacgaagatctcgaagaagttgttgtagaggaagag
tcttcatccggagaagatgaggaagaaggtgaaataagggacggctctgatgaggaggaa
gacgatactgggcggcagcaacaggatgatgctgatgagatggatgacgaagcagaagct
gtagcagaatcgtctgacgaaagagaaggaagtccagaaccacgagttgaattacaagtg
gtagactccaaaaagtttggatcgctggcggcgttgggaagcagatctaaccaagacctt
gtaagtagagattttgatggcgaggatttggaagaaggtgaaatcgcggcctcgggtgac
tcccccggagatagtccttccgaaaaggatccagacgaagaccagattgtggagccacga
agaaaacgcaagcgaagtgcccgtcaccggcgcaaggttggcgttggagcgggaaatgta
cctgttcaaggtgtatttcctgttggctttctgcaaacgtggccgggatacagcgaatat
gaacgtcctgatgtatggagcatcacgcctaggccagcaacgttcattcacactggcttt
gctaattggagctcgcaagcagcatcaaagcaggtaagagtcaatggattccaagagctg
gcagaagaagtcgccgtcgctgagatgaaagaaactcggactgttagaggaggtgcaaga
atgcaggacaacgtccagaagaagtgcaaagctgtcttgagcaagctgcaaggtgcaatg
aacaaggacgggcgacaggtatccgctttgttaatggagcttcccaagcgtcacgagctt
ccagactactacaaagtcatcgacaagccgattgacgcaaaaacgatcgaagagcacctg
gagcgcttcgattatgctacggtgctggatttcgcgggtgacgttcagctcatgctagac
aacgcctcccgctacaacacacacaacgccgaggtgcaggcagatgctcgacgactgcat
tcactcttcttccaaaggatgggcttgatgtttccagacgtggacttcaactccataaag
atcaacatcggcatccgcatgagcggctcgagatcatctcgcaagcaacgccaggtattt
gcagaggccggcagattaacgccagcagcagcaccaccaccacagcaggaaaaagaggac
gacggaacaggtagcgttagtagaggcaaggatagcagcagtagaaagaagacgagacca
ggtgatagagatagaggacaggaccaagttactcacccagctgatctagtgatttgcaag
aggaagaggaacagccggagaaag
DBGET
integrated database retrieval system
