Selaginella moellendorffii: SELMODRAFT_60593
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Entry
SELMODRAFT_60593 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_60593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_60593
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SELMODRAFT_60593
Complex C
U5 SnRNP specific factors
SELMODRAFT_60593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_19
Suf
HAT_Syf1_CNRKL1_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
9629710
NCBI-ProteinID:
XP_002961912
JGI:
60593
UniProt:
D8QTU0
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
PRSGRLDFLNAKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATAIGGAPGPGGG
VGRGRGKAPPLGGGAAAAAAVDDDDDADDKGYDENQKFDEFEGNDVGLFATGEYDEDDKE
PDQIWESVDKRMDSRRKDRREARLKLVIEQYRASNPKITEQFADVKRTLLDLPAEEWENI
PEVGDYSSRNKKRRFESFVPAPDTLLEKARQEKEHVTALDPRSRAAAGVGGAATAGGAET
PWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISD
IKKARLLLKSVIQTNPKHAPGWIAAARLEEVAGKIAAARSFIQKGCEECPKNEDVWLEAC
RLASGDAAKKVIAMAVKSIPTSVKLWMAAARLEVENAAKSRVLRKGLEFIPDSVRLWKAV
VELANEDEARILLARATECCRLHVELWLALARLETYDKARVVLNRAREALPTEPTIWIAA
AKLEEAQGNVSRVEGIIDRAIRSLQRVGVVIDREFWMKEAEAAERAGSAATCVAIVRSTI
GIGVEEEDKKRTWVADADECRKRGSIETARAIYAHALAAFPGKKSIWAARSVYERALEKC
PASTPLWLSAAQLEEKVGGISRARAMLTTARLKNRENPELWLAAIRAETRAGNWKEADAL
MAKALQECRQSGLLWAANVEMVPRAQRKTKSFDAIKNSEQDPYVIAAVGKFFWQDRKVEK
ARNWMNRAVTFAPDVGDFWALLYKFEQQHGSEAQLQEVVERCKAAEPKHGERWIRVSKAV
ENAHQTTEFILKKVVAGFGKDE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
ccgaggagcggccgcttggatttcctcaacgccaagccgccgcccaactatgtggccgga
ttggggcgcggcgccaccggattcaccactcgatccgacatcggccccgccagggcagcg
ccggatctccccgacaggtcggccaccgccattggcggcgctccagggccgggcggcggc
gtcgggcgcggcagaggcaaggcgccacctcttggcggaggagcggcggcagcggcggcg
gtagacgacgacgacgatgccgacgacaagggctacgatgagaaccagaaattcgatgaa
ttcgagggcaacgatgtggggctcttcgcgacgggtgagtatgacgaggacgacaaggag
cccgaccagatatgggagagcgtggacaagaggatggattcgcggcgcaaggaccggcgg
gaggcgcggctcaagctggtgatcgagcagtaccgagcttccaatcccaagatcacggag
cagttcgcggacgtgaagaggacgctgctggatcttccggcggaggagtgggaaaacatc
cccgaggttggcgactactcttccaggaacaagaagaggcggtttgagagctttgtgccc
gcgccggacacgctgctggaaaaggctcggcaggagaaggagcacgtcactgcgctggat
cctcgcagccgcgccgccgctggagttggcggcgctgctactgccggcggcgcggagaca
ccgtggtcgcagacgccggtgacggatcttaccgcggtcggggaggggcgggggactgtt
ctgtcgctcaagctggatcggctgtccgactcggtgagtgggctcacggtggtggatccg
aaaggatacctcaccgatctcaagagtatgaagatcacgagcgacgccgagatctccgat
atcaagaaggcgaggttgctgctcaagtcggtgatccagaccaatccaaagcatgctccc
gggtggatcgcggccgcgcggctggaagaggtggcggggaagatcgctgctgcgaggagt
ttcatccagaagggatgcgaggagtgtcccaagaacgaggacgtctggctcgaggcctgc
cggctggccagcggcgatgcggccaaaaaagtgatcgccatggcggtgaagtccatcccg
acgtccgtgaagctgtggatggcggctgcgcggctcgaggtggaaaacgccgccaagagc
cgtgttcttcgcaagggactcgagtttatacccgactcggtccggctgtggaaggcggtg
gtggagctggcgaacgaggacgaagcgaggatcttactggctcgcgctaccgagtgctgc
cgtctccacgtcgagctctggctagcgcttgcgcggctggaaacttacgacaaggcgagg
gtggtgctcaaccgagctcgcgaggcgctgccaacggagccaacaatctggatcgctgcg
gcgaagctggaggaggcacaggggaacgtttcgcgcgtggaaggcatcatcgaccgcgcg
atacgatctctccagcgggtcggggtggtgatcgaccgcgagttttggatgaaggaggcg
gaggcggcggagagggccgggtcggcggcgacgtgcgtggcgatcgtgaggagcaccatc
gggatcggtgtggaggaggaggacaagaagcggacgtgggtggcggacgcggacgagtgc
cggaagcggggctcgatcgagacggcgagagctatctacgctcatgctctggctgcgttt
cccgggaagaagagcatctgggcggcgaggagcgtgtacgagagagcgctggagaaatgc
ccggctagtactccgctgtggctctcggctgcgcagctggaagagaaagtcggggggatc
agcagggcaagagcgatgctgacgacggcgaggctcaagaacagggagaacccggagctg
tggctggcggcgatccgggcggagacgagggccgggaactggaaggaggcggacgcgctc
atggcgaaggcgctccaggagtgccggcagagcgggctgctgtgggccgcgaatgtggag
atggtgccgcgggcgcagaggaagaccaagagcttcgacgcgatcaagaacagcgagcag
gatccatacgtgatcgcggcggtggggaagtttttctggcaggacaggaaggtggagaag
gcgaggaactggatgaacagggcggtgacgtttgctccggacgtgggggatttctgggcg
ctgctgtacaagtttgagcagcagcacgggagcgaggcgcagctccaggaggtggtggag
aggtgcaaggcggcggagcccaagcacggggagaggtggatccgggtgtccaaggcggtg
gagaatgcgcaccagacgacggagtttatattgaagaaggtggtggcggggtttgggaag
gacgag
DBGET
integrated database retrieval system
