Selaginella moellendorffii: SELMODRAFT_63437
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Entry
SELMODRAFT_63437 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_63437
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SELMODRAFT_63437
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_63437
Prokaryotic type
SELMODRAFT_63437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
9633072
NCBI-ProteinID:
XP_002960699
JGI:
63437
UniProt:
D8QP88
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
RKKKVAMWIGYVGTGYKGNHCSLFLELSALNSSLTAIEADLDKAIYKAGGILDSNYGHHM
KVGWARSSRTDKGVHSLATVISLKMELPIDAWRDDPGGIEIADMINRHLPQCIRVFGVVP
VSKTFRPRMACSERSYDYFLPALCVGINQRVSTCEIKQLLEQFRLQLKLFEGEHPFHNYT
IRRNYGKPKQQDLNWRTRTPIAADNSSSSSEEEDEDGDADEPRLRVQQKPSPAYWLQELD
PTDRITAQHYRKIIRCSCGDIEKFGDTLALRVSVTGASFMVHQIRKMIGTAVAVTRKLLP
PDIIQMSLCRHSRIVLPIAPCEGLTLASSKFCSQHSTSHAINLSSLGCQRREAFWKDHVF
LEIVKAMRSERDPWNKWCEAMDSYCYLPEPNVSSLRDAWLDWK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
aggaagaagaaggtcgcaatgtggattggatacgttggaacaggctacaaaggcaatcac
tgttccttgttcttggagcttagtgctctcaatagttccttgacagccatagaggccgat
ctagacaaagctatttacaaggctggagggattctcgacagcaactacggccaccatatg
aaggtcggttgggcgagaagcagtagaactgacaagggggtgcattcactagctacagtg
atatccctgaaaatggagctgcctatagatgcttggagagacgaccctggtggaatcgag
atcgcagacatgataaatcgccatcttccacaatgtatacgcgtttttggagtcgtccca
gtaagcaaaacttttcgtcccaggatggcatgctctgaaaggtcttacgactacttcctt
ccggcgctgtgcgtgggaatcaatcaaagggtatccacttgtgagattaaacaactcctg
gaacagttcaggctccagctaaagctgtttgagggcgagcacccgtttcacaactacact
atacggcgcaactatggaaaaccaaaacaacaagatctcaactggcgtacgagaactccc
atagcggcggataattcttcttcttcttctgaagaagaagacgaggatggagatgccgac
gagccacggcttcgggtccaacagaagcctagtcctgcatactggctgcaggaactggat
ccgacagacaggatcacggcacaacattacagaaagatcatcaggtgctcttgtggtgat
atagaaaagttcggagacacgcttgctctcagagtcagtgttacgggcgcttctttcatg
gttcaccagatacgaaaaatgatcggaacggctgttgctgtgacccgaaagttgctacct
ccggacataatccaaatgtctctctgcaggcattcacggattgtcctgccaatagcacct
tgtgaaggcctgacactcgcctccagtaagttttgttcccaacacagtacatctcatgcc
atcaacttgagtagcctcggatgccaaagaagggaggccttttggaaagaccacgttttc
ctggagattgtcaaggccatgaggagtgagagggatccttggaacaagtggtgcgaagca
atggactcgtattgttatctccccgagccaaatgtaagctctcttcgtgatgcgtggtta
gactggaag
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