KEGG   Selaginella moellendorffii: SELMODRAFT_74080
Entry
SELMODRAFT_74080  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
smo03015  mRNA surveillance pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_74080
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_74080
   03015 mRNA surveillance pathway
    SELMODRAFT_74080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_74080
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_74080
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SELMODRAFT_74080
    TREX complex
     SELMODRAFT_74080
Spliceosome [BR:smo03041]
 Complex C
  Other components
   EJC/TREX
    SELMODRAFT_74080
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SELMODRAFT_74080
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 9632010
NCBI-ProteinID: XP_002960365
JGI: 74080
UniProt: D8QR23
LinkDB
Position
Unknown
AA seq 122 aa
WQHDMFEDGFVGGGARTKPVGIETGTKLFISNLDHGVSTDDIKELFSEQGDLKRCAVHFD
RSGRSKCTADVVFARKYDALKAMKHYNNVQLDGKPMKIECLGTNIATAFAARYVLTDRLC
KF
NT seq 369 nt   +upstreamnt  +downstreamnt
tggcagcatgacatgtttgaagatgggttcgtgggtggtggtgcccggactaagcccgtc
ggtattgagactggcaccaagctttttatctctaacctcgaccacggcgtctccactgac
gatatcaaggagctcttctccgagcagggagacttgaagcggtgcgcagtccacttcgac
agaagtggaagatcaaagtgtacagcggacgtggtcttcgccaggaagtacgatgcactc
aaggcgatgaagcactataacaatgtccaactcgatggaaagcccatgaagatcgagtgc
ttgggcactaacattgccaccgcctttgctgccaggtacgtcctcaccgatcgattgtgc
aagttctaa

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