KEGG   Selaginella moellendorffii: SELMODRAFT_74186
Entry
SELMODRAFT_74186  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
smo  Selaginella moellendorffii
Pathway
smo03082  ATP-dependent chromatin remodeling
smo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SELMODRAFT_74186
   03083 Polycomb repressive complex
    SELMODRAFT_74186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_74186
Enzymes [BR:smo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     SELMODRAFT_74186
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     SELMODRAFT_74186
   HDAC complexes
    Sin3A-HDAC complex
     SELMODRAFT_74186
    BRAF-HDAC complex
     SELMODRAFT_74186
    REST complex
     SELMODRAFT_74186
    SHIP complex
     SELMODRAFT_74186
    MiDAC complex
     SELMODRAFT_74186
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     SELMODRAFT_74186
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SELMODRAFT_74186
  Chromatin remodeling factors
   NuRD complex
    SELMODRAFT_74186
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 9633070
NCBI-ProteinID: XP_002961351
JGI: 74186
UniProt: D8QP89
LinkDB
Position
Unknown
AA seq 488 aa
MDGSGNSLAGSVGGDGSKRRVSYFYDPEVGNYYYGQGHPMKPHRMRMTHSLLVHYGLHLK
MEVVEPFRARDKDLCKFHADDYVDFLKQVTPETQQEFAKVLKRFNVGEDCPVFDGLYSFC
QMYTGGSVGGAVRLNTNRSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRV
LYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGDLRDVGHGKGKYYSVNVPLNE
GIDDESYQRLFKPVISKVMEVYQPGAIVLQCGADSLSGDRLGCFNLSVKGHAECVRFVRS
FNVPLLLVGGGGYTVRNVARCWCYETGVAVGVELENQMPYNDYYEYFGPEYTLLVPASNK
ENANSPEYLDSLRQQLLENISKLQHAPSVPFYERPPDMEPGEEMVLMSFEIPELLLTLCS
FQEENDADARPTKPKPGVWNGEPVDSDSEGEGDVHRQRLPKQELDFISRFVSKNPSSFQS
PEKMPLID
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggatgggagcggcaattctctggccggcagcgtcgggggcgatggatccaagcggcgc
gtctcctacttttacgatccggaggtgggcaattactactacgggcagggccacccgatg
aagcctcaccggatgcgaatgacgcacagccttttggtgcactacggcctccacctcaag
atggaggtcgtggagccattccgcgcgcgcgacaaggatctctgcaagttccacgccgac
gattacgtggatttcctcaagcaagtcacgcccgagacgcagcaggagttcgccaaagtc
ttgaagcgattcaacgtcggcgaggactgcccggtgttcgatgggttgtatagcttctgc
cagatgtataccggggggtcggtcggaggggccgtgcgcctgaacacgaatcgatccgac
atcgccatcaactggtccggcggactgcatcacgcgaaaaagtgtgaggcgtccgggttt
tgctacgtgaatgacattgttcttgcgatcctggagctcctcaagcaacaccagcgcgtg
ctctacatcgacatcgatgttcaccacggcgacggtgtcgaggaggccttctacaccacc
gacagagtcatgacggtatctttccacaagtttggcgacttcttcccggggactggcgat
ctccgggatgtcggccacgggaaagggaagtattactccgtcaacgtaccgcttaacgag
gggatcgacgacgagagctaccagcggctgttcaagccggtgataagcaaagtcatggag
gtttaccagccgggggcgattgtcttgcagtgtggtgccgactctctctcgggagatcgt
ctcggctgcttcaacctctcggtaaagggtcacgccgagtgcgtgagattcgtgcgttct
tttaatgtacctctgctcttggttggagggggaggatacacggtaagaaacgttgcaagg
tgttggtgctacgagacgggtgttgctgttggagtcgagctcgagaaccagatgccttac
aacgattactacgagtactttggtccggagtatacgttgctcgtgccggccagcaacaag
gagaatgctaattctccggagtatttggacagtctcaggcaacaacttcttgagaacatt
tcgaagctccaacatgctcctagtgttccgttctacgaaaggccaccggatatggagcct
ggcgaggaaatggtcttgatgtcttttgaaattccagaactgttattaacattgtgtagc
tttcaggaggagaatgacgctgatgcacggccaacaaagcctaagccaggagtgtggaat
ggggaaccagttgattcagactccgaaggcgagggagacgtacacaggcagaggctcccg
aaacaagaactcgatttcatcagcaggtttgtatcgaaaaatccttcaagctttcagtcc
cctgaaaaaatgccattgattgactaa

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