Selaginella moellendorffii: SELMODRAFT_74892
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Entry
SELMODRAFT_74892 CDS
T01496
Symbol
PGP4D-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_74892 (PGP4D-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_74892 (PGP4D-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_74892 (PGP4D-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_74892 (PGP4D-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_74892 (PGP4D-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_74892 (PGP4D-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_74892 (PGP4D-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_74892 (PGP4D-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_29
AAA_21
SbcC_Walker_B
RsgA_GTPase
AAA_15
AAA_16
DUF87
APS_kinase
Motif
Other DBs
NCBI-GeneID:
9641444
NCBI-ProteinID:
XP_002960296
JGI:
74892
UniProt:
D8QQP9
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MNVHDAEAPPLPAVDRAAPPDGNVGTGIEEILESATPATPIEVEDSQEVRVEVREAQGAE
EKGLDAQASGISASIGPGKGSDAKVSEVSLSIRPVEEQASVSTVVSTAAASEEPDRSKAD
EFKSLPFYKLFMFADWLDVLLMSLGIFGAVGNGMARPLMALIFGQVANAFGENEHNVSNL
VHEVSKVALRYVFLGLGTGAAALMETSFWMCAGERQAARIRALYLKSILRQDVSFFDKGI
STGEVLGRMSDDTFLIQDAIGEKVGKFVQLLSTFFGGFILAFIRGWRLALVVSSVLPLLV
IAGATMAMLISKTSSRGQMAYADAGNIVQQAVGGIRTVASFTGEDKAVGDYDTALGKAYR
AGVYQGLSSGFGMGCTLLTLYLSYALALWYGSKLILHNGYTGGAVINVMLSVLMGGMALG
QASPSLRAFAAGQAAAYKMFEVIHRVPAIDSYNMEGAILTDVQGNIEIETVNFTYPSRPG
VQILKGFCLSIPSGMTAALIGQSGSGKSTVISLLERFYDPQSGVVSIDGHDIRKLQLKWL
RQQIGLVSQEPVLFGVSVLENVAYGKDGATKEDVQAACELANAARFISNMPQGYDTHVGH
HGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQKSLERVMVDRTTVIVA
HRLSTIRDANSIFVFQQGKIVESGTHSSLLANPDGHYSQLIKLQEMRHDDHRDEESGSSS
SSSSGSGSPKVSRRRLSSLRESSLQIPVQREVQESGRSHSRWKYLFGLKHKPRDGVSTTS
SMLRLAALNKPEAPVFILGSVAAVVNGIVFPMFGLLLSSILGVFYNPDRNELRKGANFWA
SMFVVLACACFIIIPCQMVSFAYVGQNLIRRIRYLTFKTVLRQEIGWFDARENSSGAISS
RLSTDAAYVRGMVGDSLALTVQNLATIAAGLLIAFSATWELALVIFALVPLLSLQGIMQI
KVMTGFSADAKVMYEEASHVAADAISSIRSVASFCAEEKMLKLYEEKCRRPLKNGIRLGL
VSGAGFGCSNVVMFSSYGLSFWYGAQLVKDRKTTFQKVFKVFFAITMSAIGVSHAAGLAP
DLGKVKTSVISIFSMLDRKSKIDPADLQGSTLDILHGDVQFQHVSFKYPSRPGVQIFRDF
TLFVEAGTTAALVGESGCGKSTAISLIQRFYDPDCGKIFIDGVDIRSLQLRWLRQQMALV
GQEPVLFSGTLGSNIGYGKDGVSDDEIKDAAISANAYKFIMDLPDGFDTEVGERGTQLSG
GQKQRIAIARAIVKNPKILLLDEATSALDAESERLVQEALNLVMQNRTVVVVAHRLSTIV
NADVISVMKNGVVAEQGRHKELLQIENGVYSLLVKLHVRS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcatgacgcggaggcgccacctctgcccgctgtggatcgcgcagctcctccc
gatggaaatgtaggtaccggcatcgaggaaatcttggaatcggcgacgccggcgacgccg
atcgaggtagaggattcgcaggaggtccgggtagaggtccgggaggcgcaaggcgcagag
gagaagggattggatgctcaagcgtcggggatttcagcttccatcgggccaggcaaagga
tcggacgctaaagtgtcggaagtttcgttgtcgatccggcctgtggaagaacaagcatcg
gtctcgaccgtggtatcgactgctgcagctagtgaagaaccggatcgttccaaggcagac
gagtttaagtccttgcctttctacaagctcttcatgtttgccgactggctggacgtgctt
ctcatgtcgctggggatctttggagccgtcgggaatggcatggcacggccgctcatggct
ctcatctttggacaggttgccaacgcttttggggagaatgagcacaatgtctccaacctt
gtccacgaggtctccaaggttgctcttcgatacgtgtttttgggtctgggaacaggagct
gcggctttgatggagacttcattttggatgtgtgctggcgaaagacaagcagcacggatt
agagctttgtatttaaagtcgattttgcggcaggacgtctcattttttgacaagggaatc
agtactggcgaagtgttgggccgaatgtcggatgacacttttcttatacaggatgccatt
ggtgaaaaggttggaaagtttgtacagctcttgtccacgttctttggtggttttatactc
gcatttatcagaggttggaggcttgcgcttgtcgtttcatcagtgctgcccctcctcgtc
attgcgggagctacgatggctatgctgatttctaaaacgtcgagtaggggacaaatggct
tatgctgacgctggaaatattgtccaacaagctgtgggtggcattaggacggttgcatct
ttcaccggagaagacaaagctgtgggagactatgatacagctttgggaaaggcatataga
gctggtgtttatcagggtttaagttcaggttttggcatgggatgcacgttgctaacgctc
tatttgagctatgctctggctctttggtatggctccaagcttattcttcacaacggttat
acaggcggtgcagtcatcaacgtcatgctttcggttctcatgggaggcatggcactgggc
caggcttcaccatctctgcgtgcctttgcagcaggccaagcagctgcgtacaagatgttt
gaagttatacatcgcgtgcctgcaatcgattcctacaatatggagggtgccattctgaca
gacgtgcaagggaacatagagattgaaactgtgaacttcacttacccctcacgaccaggc
gtacagatcctaaaaggcttttgtttatcgatcccgtctgggatgacagctgcacttatc
ggacaaagtggaagcggaaagtctacggtcattagcttgctggaaaggttctatgaccca
caaagtggcgtggtttctatcgacggccacgacatcagaaaactacagctcaaatggctg
agacagcagattggactcgtgagtcaggagccagtccttttcggagtatctgtgttggaa
aatgtcgcctatggaaaagatggtgcaaccaaggaggatgtgcaagccgcatgtgaactg
gccaatgctgcaaggttcatcagcaacatgccacagggatatgacactcatgtcggacac
cacggtacacaattatctggtggccaaaagcagcggatagcaatcgcacgggcgatacta
aaaaatccccgtatacttttgctggatgaggctactagcgcgttggatgcggagtccgaa
agaatcgttcaaaaatctcttgaacgtgtcatggtagatcgcactaccgtgattgtggca
cacagactttcgacaatccgggacgcaaactctattttcgtgttccaacaaggaaaaata
gtagaaagtgggacgcattcaagtcttttggctaatccagatggccactattctcagctt
ataaaacttcaggaaatgcgtcatgacgaccaccgtgacgaggagtccggcagcagcagc
agcagcagcagtggtagcggcagtccgaaagtatctcgtcgtcggttgtcatctctgagg
gaatcaagccttcaaataccagtacaaagagaggtgcaggaaagtggtcgcagtcacagc
agatggaagtatctctttggtttgaaacataagcctcgggatggggtaagtacaacttcg
tcgatgctacggctggctgccttgaacaaaccagaagctcccgtgtttatcttgggctcg
gtggcagcggtagtgaatgggatagtatttcccatgtttggccttcttctttcaagcatc
ctgggagttttctataaccccgaccgaaacgagctgcgcaaaggtgctaacttctgggct
tcgatgttcgtcgttctcgcgtgcgcatgctttattattataccctgccagatggtctcc
tttgcttatgttggccagaatttgatccgacgtatacgctacctcacctttaaaacagtt
cttcgacaagagattggctggttcgatgcccgtgagaactcgagcggggctataagttcc
aggctatcaactgatgctgcttatgtgcgaggaatggtgggcgacagcttggccttgacc
gtgcaaaacttagcaacaatcgcagccggcttgctaattgcgttttctgctacgtgggag
ttggcgctcgtaatttttgcgctggtgcctttacttagcctgcaagggatcatgcaaatc
aaagttatgaccggtttcagtgccgatgcaaaggtgatgtacgaggaagctagccatgtg
gctgcggatgcaataagcagcattcgaagcgtggcttccttctgtgctgaagagaaaatg
ctgaagctatacgaagagaagtgtcgaagacctttgaagaacgggattcgcctgggactt
gttagcggtgcaggttttggctgctcgaatgtggttatgttttcgtcctacggccttagc
ttttggtatggtgctcaacttgtgaaagacagaaagacaacgtttcagaaagttttcaag
gtcttctttgcaatcacaatgtctgcaattggagtttcgcatgctgctggactggcgcca
gatctcggcaaggtcaagacttcggtcatttctatcttctcaatgcttgaccgcaagtcg
aaaatcgatccagcagatttgcaaggaagcactttggacattctgcatggtgacgtccag
tttcagcacgtaagctttaagtatcccagtcggccaggtgtgcaaatatttcgagatttc
acactgtttgttgaggccggaacgactgcagcattggttggagagagcggttgtggaaaa
tcaactgcaatctctcttatccaaaggttttatgatcctgattgcggaaagatcttcata
gatggcgtggacataaggtcgctccaactcagatggttgaggcagcagatggcattggtt
ggacaggagccagtacttttctctgggacgctgggctcaaatataggctacggaaaggat
ggagtctcagatgacgagatcaaagacgctgcgatctctgcgaacgcttacaagtttata
atggatcttcccgacggatttgacacagaagttggcgagcgtggtactcagctgtcggga
ggccagaagcaaaggatcgccatagcaagagccatcgtgaagaacccgaagatattgctc
ctagacgaagcaaccagcgctctggatgctgaatcggagcgcctagtgcaagaggcgctc
aatctcgtgatgcagaaccggaccgtggtcgtcgtggctcacaggctctccaccattgtc
aacgcagacgttatttcggtgatgaagaacggggtggtggcagaacagggcagacacaag
gagctgctccagattgaaaacggggtgtactcgctgctggtgaagctacacgttcgaagc
tga
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integrated database retrieval system
