Selaginella moellendorffii: SELMODRAFT_75016
Help
Entry
SELMODRAFT_75016 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SELMODRAFT_75016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_75016
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SELMODRAFT_75016
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SELMODRAFT_75016
DNA repair and recombination proteins [BR:
smo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SELMODRAFT_75016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-GeneID:
9642685
NCBI-ProteinID:
XP_002960586
JGI:
75016
UniProt:
D8QNL5
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MPELPEVEAARRAVELHCKGLICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGKQ
LWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEMS
FTDKRRFARVRLLQDPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQVFI
AGIGNWIADEVLYQSRIHPEQPASTLTAIDCERLRGAIKEVVMTAVDVDADLERFPRDWL
FHHRWGKKPGSVNGEFPKSFNIAHMAGS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcccgaggtagaggccgcgcggcgggcggtggagctccactgcaagggc
ctcatttgccgcgccagcgtcgccgacgacacgaccgtgatcgaaggcatggcgccgttt
gatatgcagcgccgccttgtggccaagaggatcgtcgcggcgcatcgcaaaggcaagcag
ctgtggctggagctggacgagcccccaagcatttgcttccagtttggcatggccggagct
gtgtatgtgaaaggagtaaagagcacgaagtatgtgaggtccgctgtgaaggatgaagat
gagtggccctccaaatactccaaagttcatctcgtgctggacactggtgtggagatgtcg
ttcacggacaagcgcaggtttgcacgggttcgacttttacaagatccacgcttgtctccg
ccaatatctgaactgggaccggatgcttacacagagcttccggatgaaactactttcgcc
gactctgttgcgaaaaagaagacggctatcaaggctgttctacttgaccaggtctttatc
gcggggattggcaactggattgctgatgaagtactctatcagtctagaatacatcctgag
caaccagcgtccaccttaacagctatagattgcgagcgacttcgtggggctatcaaagag
gttgtgatgactgcggttgacgttgatgctgatcttgaacgctttcctagagattggctt
tttcatcaccgctggggtaaaaagcctggcagtgtaaatggtgagtttcctaagagtttt
aatattgcgcatatggcaggttcttga
DBGET
integrated database retrieval system