Selaginella moellendorffii: SELMODRAFT_75757
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Entry
SELMODRAFT_75757 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K19022
AP-5 complex subunit beta-1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_75757
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
SELMODRAFT_75757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
DUF4788
Motif
Other DBs
NCBI-GeneID:
9663145
NCBI-ProteinID:
XP_002960166
JGI:
75757
UniProt:
D8QQ02
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MADRKISSQDWEQIFQDFRGSSDARGRWLSFYTPAGLVEQALQAVGSKKDFALKLQTLAF
LDENAALLVADDAAALDLLLDTLRSTLQAPSSADGNSSSSSIKEQMMVTVTSTMVSIDAI
GSSPRSLEILVEMLLVFINRPNHSSERHLRATACECLRELEKDYPCLLHSSAGHLLALCQ
SERTHAGQAYTLLLTSVLRNIALYMPLLRSFYAGTYSILFTTVPLIPFSISPFLSSVSSR
SSSPAVFSSSKDFSEECMKEFRRVISFLLEKPSLLTECGVAEFISDVCRTASCLDLQPSL
LKIQFWNLLHSFSPISCHGFLTILARFPDAFEGEESIVYKRLVLFSRELSQPLTVRLLAI
HWLLGVENLVTSRGREGVLPLVAKSLYPEAFDPLSLKAAKLECLARFAVVFDRQQREGSS
ENFVRVMVQEDATDMASKLLKDGLVCLSSYKWLPPSSTETRLLFRTLHRFLVSGYEHSSK
VVAVLEDGEALVDSLLFRSLQDHLVRMARTVRKLVDRILALLDRFLSCEAHHGLGERLLR
TFSEDLVPALPSNSQLPAYFPLMERIAESGKIPPRALIKSLETYLRFKVGKHSGINAANY
WLRGSEVLAICRTLLMHHQSSRVFRRLTELFGYLCLYFPDIEVRDNARFYLRMLISIPGN
RLREILTYGESQTEDSKPQLLHVSSFLGSPSPRVYLGKKASIQVSSFIHLTRETPLLVRS
SWSLVLHDTFQPILEPVTAEDQKPTAAEPGSSLIAITDDEVPGDSDHPTSDNVLRMMDAK
TADTLAVLRRHFSGVSESGVKIQVVCRLKVKSLEAATDNVDAQNLAAIYAAVISFSTSGL
YGPIPLVRVPFLLSEPSHKPKSSVTSPTASTTSEGTERRFGKVVTIVLEPQQPVPTLVDC
HIAFTDEDAQTVHGQLDSIPVGIEDLFMKPTVPASVSNEPEYLLSLFNALWYGCSGPGKL
GTEIFLLKDGKQGLGLQGSESVKLLEAQADRVFSAVENYLAGFVVSVSGTSLKEMARYSG
KFDKSCWIEEPSCSRSSSSASSQTELDKSDLLLASEESAGGEELGCFMVLVFLPPRYHLL
LRMEVSDWSTLIRIRTDYWPSLAHVDEFLESFVIPRTKMDF
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaagatttcttcacaggactgggagcagatatttcaggatttccggggc
tcgagcgatgctcgcgggcgatggctgtcgttctacacgcccgcggggctcgtggagcag
gcattgcaagcggtgggatccaagaaggattttgcgctcaagctccagacgctcgcgttt
ctggatgagaatgcggcgctgctcgtggcggacgatgccgcggcactggatctactgctg
gacacgctgcgatccacgctccaggccccatcttccgccgatgggaactcctcctcgtcc
tcgatcaaggagcagatgatggtcactgtgacgtccaccatggtgagcatcgatgcgatc
ggcagctcgccgcgcagcctggagattctggtggagatgctgctcgtcttcatcaatcgg
ccaaaccattccagcgagcgccatctccgagccactgcgtgtgagtgtctacgcgagcta
gaaaaggactatccctgccttctccattccagcgctggccatctcctagcgctgtgccag
agcgagcggactcacgcgggccaagcttacacgctccttctcaccagcgttcttcgcaac
atagcactctacatgcctcttctacgatctttctacgctggtacgtactccatcctcttc
accaccgtgcctttgatcccattctcaatctcgccattcctcagcagtgtttcttctcgc
tcctcgtcacccgcagttttttcctcgtccaaggatttctccgaggaatgcatgaaagag
tttcgtagagtgatatctttcctcctcgagaagccgagtctcttaaccgagtgtggggtg
gccgagtttatatccgatgtgtgtcgcacagccagctgcttggacttgcaacccagcttg
ctcaagatccagttctggaacctcttgcattctttcagtccgatctcctgccatggcttt
ctcaccatccttgctcgcttccctgatgctttcgaaggagaagagtcgatcgtatacaag
cgtcttgtgttgttctcgagagagctctctcagccgctcactgttcgtctcctggccata
cactggctgctgggcgtcgagaacttggtcacctccagaggcagggaaggtgttcttccg
ctggtggcgaagtcactctacccggaagcttttgatccgctctcgctcaaggccgcaaag
ctggagtgcctcgctcgctttgcagtggttttcgacaggcagcagcgagaaggctcttcc
gagaactttgtccgcgtcatggtccaggaagatgcgacggacatggccagcaagctcttg
aaggacggactggtgtgcttgtcatcttacaagtggcttcctccgagcagcacagagacg
aggctgctgttccggacacttcacaggtttttggtttccggatacgagcattcttcaaag
gtggtggcggtgttggaagatggtgaagctctggtggactctttgctcttcaggtctcta
caggatcacctcgtcagaatggctagaactgtgaggaaactcgtggatagaatcctcgct
ctgctggacaggtttctaagctgtgaggctcatcacggcctcggtgagcggctcttgaga
actttcagtgaggatctggtccctgctcttccttcgaattcgcagctcccggcctacttt
ccgttgatggagaggattgcagagagtggcaagattcctcccagagcgctcatcaaatcc
ctcgaaacttatctcaggttcaaggttggcaagcactctgggattaacgctgcgaattac
tggctccgaggaagcgaggttctggccatctgccgaactctgcttatgcatcaccagagc
tcgagagtttttcgccggctgacagagctctttggatatctgtgcctctactttccagac
atcgaggttcgagacaatgcaaggttctacctccggatgctgatatcaatcccaggaaat
cgtctgcgggaaatacttacgtacggagaaagccagacagaagattcaaagccacagctg
ctgcatgtgtcctcgtttctgggatcgccatcgcctcgagtctacctgggaaagaaggcg
tccatacaggtctcgtcctttatccatctcacccgagagactccactgctggtgcgaagc
tcgtggtctctggtgctgcacgatactttccagcccattctggagcctgtcacggcagaa
gatcagaagccgacagcagcagaaccaggtagtagcctcatcgcaataaccgacgacgaa
gttcctggcgactcggatcatccaacttcggacaatgtgctgcgtatgatggatgcaaag
actgcggatactctcgcagttcttcgaaggcacttctccggggtctcggaatcgggtgtg
aagatccaggtggtttgccggttgaaagtgaagtcactggaagcagcaacagataacgtg
gacgcacaaaacttggctgccatatatgctgcggtcatcagcttctcgacaagtggcttg
tatgggcctataccgctagtccgtgttccattcctcctgagcgagccttcacacaagcca
aagtcttcggtgacgagtccgaccgccagtaccacgtccgaaggaaccgaacgaagattt
ggcaaggtggtgacgatcgtgctggagccccagcagccggttccaactttggtcgactgc
cacattgctttcacggacgaggacgctcagaccgttcacgggcaactggacagcattcca
gtcggcatcgaggacctgttcatgaagccgacggtgccggcgagcgtctccaacgagccg
gagtatctcctgagcctgttcaacgcgctgtggtatgggtgtagcggaccagggaagctc
gggacggagatctttctcttgaaggatggaaagcaggggctgggcttgcagggctcggag
tccgtcaagctcctggaagctcaagcggacagagttttctcggccgtggagaactacttg
gctggtttcgtggtgtccgtgagcgggacttctctcaaggagatggcgagatacagtgga
aagtttgacaagagctgctggatcgaggagccgtcttgctcgaggagctcctcgagcgct
tcttcgcaaaccgagcttgacaaaagcgatttgctgctcgcgagcgaagagtccgccggc
ggagaagagctcggctgcttcatggtgctcgttttccttcctccaaggtaccatttgctc
ttgagaatggaggtctcggattggtctaccttgattcgcattagaacagactactggccg
agcctagctcacgttgacgaattcctcgaatcgttcgttatcccgagaacaaagatggat
ttctag
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integrated database retrieval system