Selaginella moellendorffii: SELMODRAFT_75917
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Entry
SELMODRAFT_75917 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SELMODRAFT_75917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_75917
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SELMODRAFT_75917
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SELMODRAFT_75917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
9663116
NCBI-ProteinID:
XP_002960803
JGI:
75917
UniProt:
D8QPT9
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAPIAKRSLSFAIAVATPERITKKPRAREEWRSLSVPPVELNLALTLLTGQTFLWKQTSP
GVFTGALGPHLVSLRQTPQDTLYRLHTEFPGAKEALREFFTLDTSLAALWSSFSAADERF
AAVAPYIQGARVLRQDPVECVFQFICSSNNHIQRITKMVDFLATQGSPLGCVDGQSFFQF
PSLEQLSFLTEKQLRDAGFGYRAKYIVGAVETLRSKESGGDEWLKSLREGSLEQATAALC
TLPGIGPKVAACVSLFSLDKHDAIPVDTHVWQIAVQYLKPELAGQRLTSKMHSAVAQAFV
SRFGAYAGWAHAVLFIAELSSHQKLLPSHLHTQRKPRTSKNSKRNEDVVSL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatcgctaagcggagcttgagcttcgcgatcgctgtcgccacgccggagaga
atcacgaagaagccgcgggcgcgggaagaatggcggagcctcagcgttcctccagtggag
ctcaatctcgccctcacgctcctcacaggtcagacattcttgtggaagcaaacaagtccc
ggcgtgttcacgggagctctggggcctcacctcgtctcgctccggcagacgccgcaggac
acactctatcgcctccacacggaatttccaggcgccaaggaggcgctgcgagaattcttc
acgctggatacgtcgctggcggctctgtggagctctttcagtgccgcggacgagcgattt
gctgctgtggctccctacattcaaggggcgagagtgctgaggcaggatccagtggaatgc
gtcttccagtttatatgctcctccaacaatcacatccagaggataacgaagatggtggat
tttctcgctactcagggatctccgcttggctgcgtggatggacaatccttcttccagttc
ccgtcgctcgagcaactatcgttcctcaccgagaaacaacttagagacgctgggtttgga
tacagagccaagtatattgtaggagccgtggagaccctgcgttccaaggaaagtggtggt
gatgaatggctgaagtccttgagagaaggatcgctagaacaggcgactgctgcactgtgt
acactccctggaatcggtcccaaggtcgccgcatgcgtgtcgctgttttcgcttgacaaa
cacgacgccattccagttgacactcacgtatggcagattgccgtgcaatatctcaaaccc
gagctcgccggacaacgcctcacatccaaaatgcacagcgccgtggcgcaggcgtttgta
agccgtttcggagcgtacgctggctgggctcacgctgttctgttcattgcggagctgtct
tcgcatcaaaagcttcttccatcacatttacatactcagaggaagccacgaacgagtaaa
aacagcaagcgcaacgaagatgttgtttctttgtaa
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