Selaginella moellendorffii: SELMODRAFT_76173
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Entry
SELMODRAFT_76173 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_76173
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
SELMODRAFT_76173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Pullul_strch_C
Motif
Other DBs
NCBI-GeneID:
9658211
NCBI-ProteinID:
XP_002961625
JGI:
76173
UniProt:
D8QS74
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
RTKQRKKASTKPHPPNEQFQSDYLLLQNQFMDHNQLQAITESLVAMLFIQCGSHAPQADF
LLFALRTLARAGLLRSDMFLLAFFRAVAMVESNPVAVTQAQSSPLVSTSGEPSTNILVTP
SSAKRASVWLRPLVCNVMGAALEAELRPVASFDMLYLTVQWINDVASGSEGSLKDVTWLD
NCLEVLRMLIDERKCRVPFYALLHDQTLLQADYWPENEALLGLFLDLHRRRDRIALHMLM
FDHHLQCPTFSTLRSTALTYAGAMGEALYGEEVAASVQRDSLDYEKALRCLKHGLRTNPS
ADIWRRVLLCAPRHRQQQQPVPPRPGPNTSWTQPGLVFNSEMTCEAVVERIMDLMQPIST
GRGFYHIFSFPAFSATSTTESGRWQEWLNFADLFYYFMRRGYLDFLEFIEKLAGAFASGE
QSIQRSNHVTWLLAQVFRLETVTQALSEDEDSRKVETAQKILSFHMADRSVDHSNAVSPQ
AKLLDYVGSSQILRLWALNRTVMEHLVGNRMPEHIQKGKTIDEWWKKVLKGERFLDYANL
DDNSMGMVWVLSHTMTQPVADAVMNWMRSNGVGEVLVGNERIAVVHETSPLPIAMLSGLS
LHLCMRLIQQIEEQIFAGQMVPSIAMLETYVRLLLVAPQTLFQHHLNGMMQKYQSGAAKA
GISLILLELLNYRLMPLYRFHGKLKQLVFDMAKIIIPMKAKRGDHRLFRLAENLGINLVL
SMKEVLLIKKEKGATTEFTETLNRIMVVSLAITIKTRGIAEFEQLLVLQTALEQILANSK
HTWSEKTMRHFPQTLREVLALRSDGRLLTLQTWQQVETTVLHQCQQLLAGDPAFAMSFVN
HSFPPHRPFLCAAAWVLMDCRPENFNCGNLGKALKELSPEDVTSNIYTLVDILLHHMHLQ
LQHGHSQQDLLLRASATLTYLVWSQEILPFDILLLALLDRDDDIHALRLVSLLLDRKEFQ
QLRVQNYCRQHGQQEHWLHPGPFQRVEPPQALGNHLAGKERYPVFFDDMALRALPVIHLV
VYRLIENDATDTAEHVLTAYSPLLRYHPTRFTFVRDTLAYFYGHLPNKLILRLLSSLDIA
KMPVSEAFIRILNTGTPPYDYYVTMLLNLVNNVIPSFTNKPRTSSPTMESFSTTRSTTPG
KSPASSTNSTDNHKAFYHHQDPGSYCQLVLETCVIELLSLPTPPAQAVAMLVQIAVRVPT
PPSQAYASASQSAAPRSPLLPTSPPSACTAESSTPSSTSVSTGQTISPFISPQVIQACGL
LLAQLPRQFHDVFYKEVARILKDCWWLKDPKKSPKEMDAAFGYSVWDPSWAVQDGTSSVI
GNAAALFHAFTANISFEWLENTHDVVNLQRPMTTVAQLRLAFRMLGPLVPRFVISRPLFA
KTLALLFTMLAEVFGRNAQVHDVTEITDLVDFMHHVVMLEAQQAGGKPRPDTLGLCNKAV
ERLHPDVQHLFQHLTVDPQRSIYAATHPKIAQRPLSCFATTT
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
aggactaagcaacgaaagaaagcttccactaaaccgcatcctcctaacgagcagttccag
tccgactatcttcttctacaaaaccagttcatggatcacaatcagcttcaagcgataaca
gagtcactcgttgccatgttgttcatacaatgtggaagtcacgctccccaagccgacttc
ttactctttgctctccggacgcttgctagagccgggttgctgcgctcggatatgtttcta
ctcgccttcttccgggccgtggctatggtggagtcgaatcctgtcgctgtgacgcaagct
cagtcttctcctttagtctcaacgtctggggaaccatcgactaatatcttggtgacaccg
tcttcggccaagagagcatcggtttggctgcgtccgctggtttgcaacgtcatgggcgct
gctctggaggccgagttgaggccagtagcgtctttcgacatgctttacctcaccgtgcag
tggatcaacgacgttgctagcggaagcgagggatcgctcaaagacgtaacttggctagac
aattgtctcgaagttttgcggatgctgatagacgagaggaaatgccgagtgccattctac
gctcttctgcacgaccagacgttgctccaagcggactattggcctgagaatgaagcgctc
ctgggactctttctcgatctgcatcggaggcgtgacaggattgctttacacatgctcatg
tttgatcatcacttgcagtgtccaaccttttcaacactgagatccacagcgttgacttat
gcaggggcgatgggagaagctctgtatggagaggaagttgctgcttccgttcagcgtgac
agcctagattatgagaaggcattgcggtgtcttaaacacggcctacgaacaaatccatcc
gccgacatttggaggcgtgttttgttatgtgctccacggcaccggcagcagcagcagcct
gtccctcccagaccggggcctaacacttcgtggacacagccggggctagtttttaactcg
gaaatgacttgcgaggctgtagtggaaagaattatggatcttatgcagcctatttctacg
ggtaggggattttatcatattttctcattccctgccttcagcgcgacatccacaacagag
tcggggagatggcaggaatggctcaactttgctgacttgttctactattttatgcggaga
ggctacctggattttcttgagtttattgaaaagctggccggggcttttgcaagtggagag
cagagtatacaacggagcaatcatgtcacctggttgcttgcacaagtatttcgcctcgaa
accgtcacacaggctctgagtgaggacgaggactcgagaaaggtggagactgctcaaaag
atactgtcgtttcacatggccgaccgctccgtggatcatagcaatgctgtatctcctcag
gcgaagcttttggattacgtgggaagcagtcagattttacgactctgggcattgaatcga
actgtgatggagcatttggtgggaaatcgaatgccagagcacattcagaaagggaaaaca
attgatgaatggtggaagaaagttttgaaaggagaacgctttctagactatgctaacctg
gatgacaactccatgggaatggtgtgggttttatcacacaccatgacgcaacccgtggct
gacgctgtgatgaattggatgcggtccaacggtgtgggggaggttcttgttggaaatgaa
agaatagcggtggttcacgagacaagcccgcttccgattgccatgctgtctgggttatct
cttcatctttgcatgcggcttatacaacaaattgaggaacaaatatttgctggtcagatg
gtaccaagcatagcaatgctggaaacgtacgtgcgcttgcttcttgtcgcaccacagaca
ttattccagcatcacctgaacggaatgatgcaaaagtaccaaagcggtgcagcaaaagca
ggaatttcgcttattcttcttgagcttctcaactatcgtttgatgcccttgtacaggttc
catggaaaactgaagcagctagtgtttgatatggctaagattataattccaatgaaggcc
aaacgtggagaccaccgactcttccgtcttgcagaaaaccttggaattaaccttgttctt
tcaatgaaagaagttttgcttataaagaaggagaagggtgccacgacggaattcacggaa
actttgaaccgaattatggtagtaagtctcgctattactatcaagacccggggcattgca
gaattcgagcagctacttgttctacaaactgcgttagagcaaatacttgcgaatagtaaa
catacatggtcagagaagacaatgcggcacttcccgcagacgcttcgtgaagttctcgct
ttaagatctgatggaagactgctaactcttcaaacttggcagcaggttgagactactgtt
ttgcaccagtgtcaacagcttcttgcaggtgacccagcatttgccatgtcgtttgtaaat
cacagttttcctccacaccgtccgttcctctgtgccgccgcctgggttttgatggattgc
cgtcctgagaatttcaactgtggaaatcttggtaaggcgttgaaagagctgtcacctgaa
gacgtaacctcgaatatctacacgcttgttgatatcctacttcatcatatgcacctccag
ctacagcacggacactcgcagcaggatcttctgttgagggccagtgctacgttaacttat
ctcgtatggtcccaggaaatattaccatttgacatactgcttttggcgctgctagaccgt
gacgatgacattcatgcgctacgactagttagtttgctccttgatcgcaaggagtttcag
cagcttagagttcagaattactgtcggcagcatggtcagcaggagcactggctgcatccg
gggcctttccaacgtgtagagccgccacaggcccttggaaatcacttggctggaaaggag
aggtaccctgtattcttcgatgacatggctttgcgcgccttgcctgtcatccaccttgtt
gtctaccgcctgatagaaaacgacgccacggacaccgcagaacatgttttgactgcatac
tctcctttgctacgttaccatcctactcgtttcacatttgtgcgtgatactcttgcctac
ttctatggtcatctgccgaacaagcttatcttgagactgctgagcagcctagacattgcg
aagatgccggtgtcggaggcgtttattcggatactcaacactggaacgcctccatatgac
tactacgtaacaatgctcttgaatctggtaaacaacgtaatcccctcgttcactaacaag
ccaagaacgtcatccccgacaatggaaagttttagcacgacgcgatcaactacgcctggc
aagagcccggcatcatctaccaattcgactgacaatcacaaggcgttttatcaccaccag
gatcctggaagctactgccaacttgtcctggaaacctgtgtcatcgagctactatctttg
ccaacacctccagcgcaggcagtagcaatgctcgtccagatagcagttcgtgttccaaca
cctccttctcaggcttacgcctcagcttcacagtcagcagctccacggagtcccctgttg
ccaacgtctcctccatcagcatgcacggcagaaagctccactccgtcttctacctccgtc
tcaaccggccaaacgatctcgcctttcatatctccgcaagtgatccaagcttgcggcctt
cttttggctcagctacccagacaattccacgatgtgttctacaaggaagtggcacgtata
ctcaaggactgttggtggctcaaagatccaaagaaaagtcccaaggagatggatgctgct
ttcggctattcggtatgggacccctcttgggcggttcaagacgggacgtcaagtgtgata
gggaatgcggccgctttgttccatgcattcacggccaacatatctttcgagtggcttgaa
aacacgcacgacgtcgtcaatttgcaaaggccgatgaccacagtcgcgcagctgcggctc
gcgtttcggatgttgggaccgttagtgccgcgcttcgtgatctcacgacctctgttcgca
aagactttagcattgctattcacaatgctcgcagaggtgtttggccgaaacgcccaagtt
cacgacgtcaccgaaatcaccgatctagtagatttcatgcaccatgttgtaatgctggaa
gcacagcaggccggtggaaaaccaaggcccgacactctcggcctctgcaacaaagcggtg
gagcgcttacatcccgacgtacaacacttgttccagcatcttacggtagatccccagcga
tcgatttacgctgccactcatcccaagatcgctcaaaggccactctcatgcttcgctaca
acgacgtaa
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integrated database retrieval system