Selaginella moellendorffii: SELMODRAFT_78506
Help
Entry
SELMODRAFT_78506 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_78506
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SELMODRAFT_78506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Dsc3_C
PA4575
Motif
Other DBs
NCBI-GeneID:
9660950
NCBI-ProteinID:
XP_002962901
JGI:
78506
UniProt:
D8QUW5
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MGKAKKGKHRLDRFYYLAKEQGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQV
AVEKMPVRSVVIGVDLVPIRPVRGALSLQGDITTPKCASDIGKILDQNGLRMVDVVLHDG
SPNVGGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKV
EVTKPIASRSTSAEIYVVGLKYLAPVKIDPRNLDPRFLFEEIPQPPKVIDVLRSSKQKRH
REGYDDANTTFRKDCTAADFVWSEKPLELLGSITSISFEDPKSSPIKDHAETTDEIKALC
EDLRVLGKKEFKQLLKWCLHVRKALSKTSASEETEGDKAAEKDDDEKEDEDEDMLKKMEE
LKSLMDSKSKQAKKKAAKRKQKLNARNRTGMQVDVLGDTYGERDLFSLGSIKAKKSLDRV
EDADDDMLDSDDNVKDETSKQDMERKDDEDNDVDSDVERERYNDELESFLDRAYERYRSK
TESNTARRKRARMANAGDEKLWEEDVEENASEEEENEVEEEEEEEANPLVVSLPKAKLSK
EQIAQQWFSQDIFAGLDQTPETDTNKDKTAKDAPPSDVTVAPGKLKRAREDFEVVAAEPS
GSSDSSSDEEEDYDSDAKAEILTYAKKMLRKKDRDRIIDDAYNKYMFDDEGLPEWFADDE
KRHCKIQKPFTKEEVQAMRAQFRAIDARPVKKVAEAKARKKRRVMKKMEQARSRAAAIAD
QPDISNKSKNRMMDKVYKKAAATTNKRPKRELVVAKKGVRVKGGKGKLVVDRRMKKDSRS
RGSGKPGKGGGKGGKTGGKGASKGKRGKPANRGKGGKPASKGNGGAKPRR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcgaagaaggggaagcaccgcttggatcgcttctactacctcgccaaggag
cagggctaccgctcccgtgccgcattcaagctcgtgcagctcgatcgcaagtatggcttc
ctcagctcggcgcactcggtgctggatttgtgcgcggcgcccgggggatggatgcaggtg
gccgtggagaagatgcccgtgaggtctgtggtaatcggcgtggatctggtgccgattcgt
cccgtgagaggggcgctgtcgctccagggcgatatcaccactccaaaatgcgcgtcggat
attgggaagattctcgaccagaacgggttgaggatggtcgatgttgtgctccacgatggc
tcccccaatgtgggaggtgcctgggccaaagaagccatgacgcagtcgtctcttgtcctg
gattctttgaagttggctaccaagtttctggctcccaaaggaacgtttgtcaccaaggtt
tttcgatcccaagattataacgcgctgaagtatgcatttgaacagctgtttgccaaggtg
gaagtcacgaaacccatagcaagtcgttcgacatcagctgaaatatacgtggttggtctc
aagtatctggcacccgtgaaaatcgatccgcgtaacttggaccctcgctttttatttgaa
gagattcctcagcccccaaaggtgatcgacgttcttcgtagtagtaaacagaaacgtcac
cgcgagggatacgatgacgcaaacactacttttcgtaaagactgcacggcagcagacttc
gtctggtccgaaaaacctctagagcttcttggtagcatcacgtctatttcgtttgaggat
ccgaaaagttcgccaatcaaagaccacgctgaaacaactgacgagataaaagcattatgc
gaagaccttagagttctggggaagaaagaattcaagcaacttttgaagtggtgcctgcat
gtacgaaaagctctttcgaaaacgtcagcttcggaggaaacagagggtgataaggctgct
gaaaaggatgacgacgaaaaagaagatgaagacgaggatatgctaaagaaaatggaggag
ctcaagtctctaatggattcgaaaagcaagcaggcgaagaagaaggctgccaagcgtaaa
cagaagctaaacgcacgaaatagaacagggatgcaagtcgatgtcttgggagacacttat
ggcgagcgggatctgttctctttgggctcaatcaaggcgaagaaaagcttggatcgggtg
gaagatgcggatgacgacatgttggacagcgatgacaatgtgaaggatgaaacgagtaag
caggacatggagcggaaggatgacgaagacaatgatgtggattctgacgtcgagcgcgaa
agatacaacgacgagctggaatctttcctcgatcgtgcatacgaacgctaccggagcaag
actgaaagcaacactgcacggcggaaacgcgcaagaatggctaacgcaggagacgaaaag
ctgtgggaggaggacgtggaagagaatgcttctgaggaagaagaaaacgaagtagaagaa
gaggaggaggaggaggccaatcctctggtcgtgtcgcttcccaaggccaagctctcgaag
gaacagattgcacagcaatggttcagtcaagacatcttcgccggtttagatcaaaccccg
gagacggataccaacaaggacaagactgccaaggacgctcctccgagcgatgtcacggtt
gcgccaggaaagctcaagagagcacgggaagactttgaggttgtagcagccgagccgagt
ggttcgtccgactcttcctcggacgaagaggaggactacgacagcgacgccaaggcagag
atcctcacttacgccaagaagatgctgcggaagaaggacagagacaggatcatcgacgac
gcctacaacaagtacatgttcgacgacgaggggctcccggaatggttcgcggacgacgag
aagcggcactgcaagattcagaagccattcaccaaggaagaggtccaggcgatgagggcg
cagtttagagcgatagacgccaggcccgtgaagaaggttgctgaggccaaggctcgcaag
aagcggagggtgatgaagaaaatggagcaagcacgaagcagagcggcggcgattgccgat
cagccggacatctcgaacaagtccaagaacaggatgatggacaaggtttacaagaaagcg
gcggcgacgaccaataagcgtcccaagcgggagctcgttgtggcgaagaagggcgtgagg
gtcaagggtggcaaagggaagcttgtggtggatcgtcgcatgaagaaggactcacgatcc
cgaggaagtggcaagcctggcaaaggcggtggaaaaggtggtaagacgggtggcaaaggt
gcgagcaaaggcaaacgtggcaagcctgcgaacagaggcaaaggtggcaagcctgcgagc
aaaggcaatggtggcgccaagcccagaagatga
DBGET
integrated database retrieval system