Selaginella moellendorffii: SELMODRAFT_78512
Help
Entry
SELMODRAFT_78512 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_78512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_78512
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
SELMODRAFT_78512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_SPT8
Peptidase_M10_C
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
9662014
NCBI-ProteinID:
XP_002962876
JGI:
78512
UniProt:
D8QUS0
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MEDCEDFSEEIKGLEAESPRAKIAARRSLVFSSSGFNAGKVESAAAVASSPKVNRITYSD
RFIPSRSSSNLTGFALLDKSPSSNVSNVSHGSETREDSAAAYSMLLRTELFGSDPGGPMV
PNTPEKLLGGSSRDSARTPMSPTRNLFRFKNEHRGGAGACASPESPFSLSPVGLDVALAG
TVTSPRKAPRKIARSPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGPCVYLWSACTSKV
TKLCDLSPNDGVCSVGWTQRGTYLAVGTNLGEVQIWDATRCKRVRTMGGHRTRVGTLAWS
SNVLSSGSRDRNILQRDIRAPEDFVNRLVGHKSEVCGLKWSYDDRELASGGNDNQLFVWN
QLSTQPVLKFSEHTAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTGTSTHLSCVDTGSQ
VCNLVWSKNVNELVSTHGYSQNQIIVWRYPAMSKLSTLTGHSYRVLYLAISPDGQTIVTG
AGDETLRFWNVFPCPKSQSAVRNTGIWSLGRTHIR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaagattgcgaggatttctccgaggaaatcaagggattggaggcggagtcacccagg
gccaagatcgcggcgaggcgatccctcgtcttctccagctccggcttcaatgcgggcaag
gtggagagcgccgcggcggtggcgtccagtcccaaggtgaatagaatcacatatagtgat
cgcttcatccccagcaggtcgagctccaacctcacaggctttgcgctgctcgataagtcg
ccctcttccaacgtgagtaatgtctctcacggcagcgagactagagaggacagcgccgct
gcttactcgatgctactccggacggagctctttggcagcgatcccggggggcctatggtg
ccaaacacgcccgagaagctcttggggggatcatccagggactctgcgagaactccgatg
agcccgaccaggaacctgttcagatttaagaacgagcaccgtggcggtgctggagcttgc
gcgtcacccgagtcaccattttctctctcgccggttggcctggatgttgctcttgctgga
acggtcactagcccgcgaaaggctccgcggaagatcgccaggtctccttacaaggtgctg
gacgcgcctgctcttcaagacgacttttacttaaacttggtggattggtcgtcgctcaat
gttttagctgtgggacttggaccgtgcgtctatctctggagcgcatgcactagcaaggtt
acgaagctttgtgacttaagtcccaacgatggtgtttgctcggttggatggacgcaacgc
ggaacgtatctagcagtaggaacgaacctcggtgaagttcagatttgggacgcgacacgg
tgcaaaagggtcaggacgatgggaggtcaccgaacaagagtcggaaccttggcttggagc
tcaaacgtcctctcgtctggcagtcgtgataggaacatattgcaacgagatatacgagcc
ccggaggattttgtcaacaggcttgttgggcataagtctgaggtttgcggtctcaagtgg
tcttatgatgaccgtgagcttgcgtctggtggtaatgataatcagctttttgtttggaat
caactatctactcaaccagttctcaagtttagcgagcacaccgctgcagtaaaagccatt
gcttggtcgccgcatcagcatggcttgcttgcttctggtggcggtaccgcggatagatgt
ataagattttggaacacggggacgagtacacatttaagctgtgttgacactggtagtcag
gtttgcaacttggtatggtcaaaaaatgtaaatgaacttgttagcacccacgggtattcg
cagaatcagattatagtgtggagatacccggccatgtcaaaactttctactctcacggga
cactcctacagagttctatatcttgctatttctcccgatggccagacaattgtcaccgga
gcgggggacgagacattacggttttggaatgtttttccttgtccaaagtctcagagcgct
gttcgaaatacaggaatttggtccttgggacgaactcacatacggtag
DBGET
integrated database retrieval system