KEGG   Selaginella moellendorffii: SELMODRAFT_78691
Entry
SELMODRAFT_78691  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
smo  Selaginella moellendorffii
Pathway
smo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SELMODRAFT_78691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_78691
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SELMODRAFT_78691
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 VID27 Cytochrom_D1 VPS8_N
Other DBs
NCBI-GeneID: 9660762
NCBI-ProteinID: XP_002962822
JGI: 78691
UniProt: D8QUF4
LinkDB
Position
Unknown
AA seq 900 aa
MGIFEAFRAIGYISDGVPFAVQRSGVETLVTVSVGKAWQRFNCSKLLLVFVGPQLEKSIR
ALACYEGFTFAASGNNVVVFDRAHQIAVWKAHSSKIKYLLEFGHFILSSDTEGHVCVWDT
GILSTKEDGKPIAELHLGRGVTCLMHPQTYLDKVLFGFEDGRLQLWNIKSRKMVHEFKGW
NSPVLTCVSSPALDVVGIGCGDGKIHVHNIRYDETIATFTHTTRGGVTALSFRTDGHAFL
AAGGSSGAISIWDLEKKKLQTVINDAHDSEVASLHFLANEPVLMSNSKDNSLKMWIFDSL
DGDARLLRYRSGHSAPPTCIRYYGEGRCILSGGQDRAFRLFSTIQDQQSRELSQGNVTKR
AKRLKLKEEEIKLAPIVAFDAAEIRERDWCNVVTCHLDDCSAYTWRLQNFVIGEHVLKPC
PEKPSPVKVCSISACGNFVTLGTASGHIERFNLQSGLHRGSYRDGTLADQSAHTGAVHGL
ASDATNACLFSAGYDKLIKVWNFKSLQLKASISPGSPIIKMTYHRGNGLAAVSSDDHVIR
LYDMVAVRLVRVFSGHTDRITDFTFSEDGKWLLSSAMDATVRVWDVVAAKQLDAMRVNAA
ITALSLSPGMDMLATCHVNHKGIYLWGNRYMYSAGDIELGSGNAVKDVALPSSTGSRPEE
GGDSNPEKVSRDNIELPGLEEKSELPSTAQITPELVTLSLLPKNQWQGLVHLDTVKARNK
PIAAPKKPERAPFFLPTLPSLSGVPAFASPDQDSQKTNSFTTLPEAENVSSFGSLEAANF
CFSQGLELLEHMKNLTSSSLDAEIRFLQIVDEDAPEEQIRDIGSLIDFLIKATSLNRDFD
FVQAVMLLVLRIHGESILTYSQLRDKAETLREVQSSTWKRLDELLQKNRCIVSFLSNSAY
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgggcattttcgaagccttccgggcgatcggctacatcagcgatggcgtcccattcgca
gtgcagcggagcggcgttgagacgctcgtcacggtgagcgtcggcaaggcgtggcagcga
ttcaattgctcgaagctactgctggtttttgtaggtcctcagctggaaaaatccatcaga
gcgttggcttgctatgaaggctttacgtttgcagccagtggaaataatgtagtggttttc
gatcgagcacaccagatcgctgtgtggaaagctcactcgagcaaaattaaatatctactg
gaattcggccacttcatcttgagttccgacactgaaggacacgtttgtgtgtgggacacg
ggtattctttctacgaaggaagacggtaagccgattgcagaactccatcttggtcgtggc
gtgacatgcttgatgcatccacaaacataccttgacaaggtcctttttggtttcgaggat
ggccgattacagctttggaatattaaatccagaaagatggtccatgagttcaaaggatgg
aactctcccgttcttacttgcgtatcgtctccagcgctggacgtcgttggaatcgggtgt
ggagatgggaaaatccatgtgcacaatatccgatacgatgaaactattgccactttcaca
catactaccagagggggtgtgacggcactttcgttcaggacagatggtcacgcgttcttg
gctgccggaggatcatccggtgccataagtatttgggacttggaaaagaagaaactgcag
actgttatcaacgacgctcacgactcagaagtagcgtctttgcattttctagctaacgaa
cctgtattaatgagcaactcaaaggacaattctttgaagatgtggatatttgattcatta
gatggtgatgcaaggcttctgcggtacaggagtggtcacagcgctccacctacgtgcata
aggtactacggtgaagggcgatgcatcttgtccggtggccaagaccgagctttccgctta
ttttcgaccattcaagatcaacagagcagagagctttctcaagggaatgtaaccaagcgc
gctaaaaggctaaagctaaaggaagaagaaataaagctcgcacctatcgtcgcctttgac
gcagccgaaatccgagagcgtgactggtgcaatgtcgtcacatgtcatctggacgattgc
tctgcatatacctggcgtttacagaactttgttattggcgagcatgtcctcaagccttgc
cctgagaagcctagccctgtgaaggtttgcagtatcagtgcttgcggaaattttgtgacg
cttggtactgcgtcaggacacattgagcggtttaacttgcagtcgggacttcaccgtggt
tcataccgcgatggcacgttggctgatcaaagcgcacatacaggagcagtgcatggtctc
gcttcagatgcgacgaacgcgtgccttttcagcgctggctacgataagttaatcaaggtg
tggaacttcaagtccttgcagctaaaagcctctattagtcccggctctccgataataaaa
atgacttaccaccgtgggaacggcctcgctgcggtatcgtcagacgaccacgttataaga
ttgtacgacatggttgcagtgcggctggttcgagttttctcgggccacacagaccggatc
accgatttcactttcagtgaggatgggaaatggctcttgtcctcggctatggatgcaact
gtaagagtatgggatgtggttgcagcaaagcaactggacgcaatgcgtgtaaatgctgca
atcacggccctctctctatcaccaggcatggacatgttggctacatgtcacgtaaatcac
aaaggcatatatctttggggtaatcgctacatgtactctgctggagatattgaacttgga
agcggaaatgccgtaaaagatgtcgcgctcccatcgtcgaccggatctcggccagaagaa
ggcggggacagtaatccagaaaaagtttctcgggataatattgagttgcctggcctagaa
gagaagtccgagctccccagcactgctcaaatcactccagagctggtaaccttatcgcta
cttccgaaaaaccagtggcaaggtcttgtgcatcttgatacagtcaaggctcgcaacaaa
ccgatagcagcgcctaaaaaaccggagagagctccgtttttcttgccaacgcttccttct
ctctctggtgtccctgcgttcgcttctccagaccaagactcgcagaaaaccaactcgttc
acgactttgccagaagcggagaatgtaagctcttttggttctttagaagcagctaacttt
tgtttttctcaaggtctggagcttttggagcacatgaaaaacttgacatcgtcatctctc
gacgccgaaattcgcttcttgcaaatagtagacgaggatgctcccgaggaacagatccgg
gatatcggttcgctcatcgactttctcatcaaagctacgtctctaaacagagatttcgac
tttgtccaggcagtaatgctactcgtgcttcgaatccacggcgagagcattctcacttac
tcgcagctgcgagacaaagcagagacgctgcgtgaagtgcaaagctcgacatggaagaga
ctagacgagctcctccagaaaaacaggtgcattgtaagttttctcagtaactccgcctac
taa

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