Selaginella moellendorffii: SELMODRAFT_78845
Help
Entry
SELMODRAFT_78845 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_78845
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Other 90S particles
SELMODRAFT_78845
Pre-60S particles
Other pre-60S particles
SELMODRAFT_78845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
MMS19_C
HTH_56
Motif
Other DBs
NCBI-GeneID:
9661625
NCBI-ProteinID:
XP_002963130
JGI:
78845
UniProt:
D8QW92
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MEEEEEDVGRALLNRFHNSPAPEHKQLLAVVSAVMEVLKEQGLPLIPTAYFAATMAPLEQ
QCNAGAVDGADTTAFLTFLATLLPKLPASVLRSTSGKALVVLDKVLGDAKLPAATAKPAL
SCIECILCAADRSSWPALAGSFQLLLKFCVDMRPKVRRRAYLCAAQVLSSFHGSAALDKA
SDLVASSFEECASPFLAKGKSNEDAAAGALKLLHMIGAMRLLLPAMSPKTIARVLPSVTL
LITLKQSLVTRNVLNVLLSLGRRSRTGVSSAALVGVIRAVLSLVTADNRDVDEVMTAVHV
IEQGLSNLYAIDPKLCAGQLPAPFDAITDLFASEQEEVVFGAAECLRGLADRFIDGAMLR
QLETDPVAIESICSSVERSLSYEYSGAWDKALLVVSALFQKMGEASFRFMKGIVKVLAEL
QKLRDEDLPYFTFDTLLQLHNSFGAAVVAMGPERFLELLPLDMDATQLDKARIWLIPILK
QHLVGARLKYFATTIGPLAENLAVKAHERSLQLSGAPAKNAEACAQALWALLPSFCNYPV
DTKDSFQVIAKLLGESMRKYPDLRGVISSSIQTLIKQNKSICDANDGMDVDLDAKEKACY
SKDIASANLSAISAFSDKFLPLLFNIFCESPPEKRGELQAAIGAFASISSKATVQKFFRT
VMEKLLEATKDTNAKERRCMFMDLALSLVGGLDHKGLSALFAVAKPALQDPDSGVQKKGY
KVLAGILKEHTDFLSSKEQEIFEVIVEATSACQSSAKQYRVACLQLLILHLVQQGDENTN
DYIAFLLKESVLALKENNKKTRDGAYELLIGIGNGLLQVSDEKLVQFFRKLVGCSAVTGS
AGEPHVISAALSAISRMVYEFPAELKGEIHRYLPSAFYLLRNYKSREVIKSVLGLLKVIV
AMMSKEELMPRLSEMVEAMMVWSEDPKNRFKAKVVRGILEKLLKKCGFEAVSAVMPKEHA
KHLVNIRKVLDSKKRSIIDGEDDKRSHFTRATTTRRSKWKHTDIFSDSDEDNDGDDESEG
ATAFTRSKATTASRSKKLPKQKRRLPEDERGRDEPLDLLDVSKTRAALSTLGKPKKSQAE
SDEDMDFDPDGRLIVEERQPQQQQQQGRASKRPRDEEEEGEEEEFGRSKKGAKKRGKVAA
ENQKKRSTGWSYKGDEYVNKKGAGGDVKRDGKLEPYAYWPLDAKLLNRRGEKKAAARKGM
ESVFKVTKKLEGLSVNKALGGIQKKRKKQHNKAHKSGANSKSARSKR
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggaggatgtggggcgcgcgctgctcaatcgcttccacaattctccg
gcgcccgagcacaagcagctactggcggtggtaagcgcggtgatggaggtgctgaaagag
cagggcctgccgctgattcccacggcgtatttcgccgcgaccatggcgccgctggagcag
caatgcaatgcaggcgccgtggatggagccgataccacggctttcctcacattcctggcc
acgctccttcccaagcttcccgcctccgtgctgcgatccacgagtggaaaggctctggtt
gttttggacaaggtgctgggggacgcaaaacttccggctgccactgccaagcccgcgctg
tcgtgcatcgagtgcatcctttgcgccgccgatcgatcgagctggccggctctggctgga
tcgttccagttgcttctcaagttttgcgtggatatgagaccaaaggtgcgaaggcgcgct
tacttgtgcgctgcgcaagtcttgtctagcttccatggctcggcggctctcgacaaagct
agcgacttagttgcctcgtcgttcgaagaatgcgcgtcacctttcctggccaaaggcaag
agcaacgaggacgctgccgctggtgctctgaagctcttacacatgatcggggccatgcgg
cttcttctgccagccatgtcgcccaagaccatcgcgagagtgcttcccagcgtcacactt
ctcatcactttgaagcagtcactcgtcaccaggaacgtactcaatgttcttctttctctg
ggaagaagatccaggacgggcgtttcatcggcggcattggtgggcgttattcgtgctgtt
ctctccctcgtcacggctgataacagggatgtggacgaggtcatgacggcagttcatgtg
atagagcaggggctgtctaacttgtacgccatcgatcctaaactctgcgccggccagctt
ccggcgccattcgatgccatcacagatctctttgcttcggaacaggaagaggttgtgttt
ggtgcagcggagtgtctccgaggcttagcagatcgcttcatagatggcgcaatgctgaga
cagctagaaaccgatccagttgctattgaaagtatctgttcgtccgttgaaaggtcattg
agctatgaatattccggcgcctgggataaagctttgctcgttgtctcggcacttttccag
aaaatgggtgaggcctcctttcgattcatgaaaggaattgttaaagttctcgccgaacta
caaaaacttagagacgaggacttgccttatttcacgtttgatactcttttacagctacac
aatagttttggagcagccgttgtggctatgggaccagaacgttttttggagctcttgcca
ttggacatggatgccacgcagctagacaaagcccgcatctggttgatacctatcttgaag
caacatcttgttggagcaaggctcaaatacttcgcgactaccatcggtcctttggcagaa
aatcttgcagtaaaagcacatgagcgttctttgcagctttctggggcgcccgcaaaaaat
gcagaagcatgcgcacaagctctttgggctcttcttccatccttttgcaattatcctgtg
gacaccaaagacagcttccaggtgattgcaaagcttcttggggagtcaatgagaaagtat
ccggaccttagaggagtaatctcttccagcatccagacattgataaagcaaaacaaatct
atctgcgacgctaatgacggcatggacgtggatttggatgcaaaggaaaaagcatgttat
tccaaggacattgcctcggcaaacttgtcagccatttctgcgttttcggataagtttctt
ccacttcttttcaatatattttgcgagtcaccaccagaaaaacggggagagttacaggct
gctattggtgcttttgcgtctatatcaagcaaagctactgttcagaagtttttccgaacg
gtcatggagaagcttttggaagccaccaaagatacaaatgcgaaagagagaaggtgcatg
tttatggatcttgctttgtcactagttggtggtttggatcataaaggcttgagcgcgctt
ttcgcagttgcaaagcctgcattgcaggatccagactctggtgttcagaaaaaaggatac
aaagttcttgctggtattttgaaggaacatactgattttctctcttcaaaagagcaagaa
atatttgaagttatcgtggaagctacatctgcatgccagtcctctgcaaaacaatacagg
gttgcttgcttgcagttgttgattctacatctcgtgcagcagggggacgagaatacgaac
gactacatagcattccttctcaaagagtctgttcttgcgctgaaggagaataacaagaaa
acaagagacggagcttatgagcttttaattggaattgggaatggcctgttgcaagtttct
gacgagaaacttgtccaattttttagaaagttggtgggatgttccgcagtaacaggctca
gctggagagccgcatgtcataagtgcggctctcagtgcaatttcaaggatggtgtacgag
ttcccagcggagctgaaaggcgagatacaccgatatcttccgagtgcattttatttactt
cgcaactacaagagtcgagaagtaatcaagtccgttcttggccttttaaaagtaatcgtt
gctatgatgtctaaagaggagcttatgccccgtttgagtgaaatggtggaggctatgatg
gtttggtctgaagatccgaagaacagatttaaagcaaaggtcgtccgcgggatactggag
aagttgttaaaaaaatgtggatttgaggccgtttctgctgttatgcccaaagagcatgcc
aagcacctcgtcaacattcgaaaggtacttgattcaaaaaagagatcaattattgatggc
gaggatgacaagagatcgcacttcactcgtgcaaccacaaccaggcgcagtaagtggaag
cacacggacatcttctctgactcggacgaggacaacgatggcgacgacgagagcgaaggt
gcgacggctttcacaaggtccaaggctactactgccagcaggtcaaagaagctgccaaag
caaaagaggaggctcccggaagacgagcgaggaagggacgagcctctggatcttcttgac
gtttcaaagacgagggcggcactgtcaactctaggaaagccaaagaagagccaggcagag
agcgacgaagacatggattttgatccagatggccgtttaatagtggaagaaaggcagccg
cagcagcagcagcagcaaggacgcgcctccaagcggccgagagacgaggaagaggaagga
gaagaagaagagtttggcaggagcaaaaaaggtgctaagaaacggggcaaagtggccgcc
gagaaccaaaagaagaggagcactggctggtcgtacaagggcgacgagtacgtgaacaag
aaaggcgctggaggggacgtgaagagggacgggaagctagagccgtacgcgtactggccc
ctggacgctaaattgcttaaccggcgcggggagaagaaggccgcggctcgcaagggaatg
gagagcgttttcaaggtgaccaagaagctcgagggcctgagcgtgaacaaggcactgggg
ggaatccagaagaagcggaagaagcagcacaacaaagctcacaagagtggagctaacagc
aagtccgcaaggagcaaacgatga
DBGET
integrated database retrieval system