Selaginella moellendorffii: SELMODRAFT_78854
Help
Entry
SELMODRAFT_78854 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_78854
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SELMODRAFT_78854
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_78854
Prokaryotic type
SELMODRAFT_78854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF5324
Motif
Other DBs
NCBI-GeneID:
9661814
NCBI-ProteinID:
XP_002962388
JGI:
78854
UniProt:
D8QUD6
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
KWRIVVSYDGTRFSGWQYQPDFPTVQGLIEDALTKLTRYTREELLMAAASRTDAGVHALG
QVAHFHSPACIGDLSRIHRGLNGTLPHEIRVREISPAKSSFHAQACARTKRYQYKLFVAP
VMDPLLRLYAYHVPERLDVAAMAEACGYFVGKHDFSTFSNSSTLRPLQNPVREILRFDLL
EQASGPVLCFEIEGTGFFHKQIRNMVGLIVAIGKGEHEARVIPELLAMKDRQKLARVSIT
APSRGLTLVSVHYDQSDLDLPENLLCRK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
aaatggaggattgtggtttcgtatgacggcactcgtttctctgggtggcagtaccagccg
gattttccaaccgtccaaggattgatcgaggatgcactgacaaagctaacgcgttacacc
cgagaagagctcctcatggcggccgcaagtaggacggatgctggagttcacgctctgggc
caggtcgcgcatttccattctcctgcttgtatcggcgacttgagccggatccatcggggc
ctaaacggcacgcttcctcacgagattcgtgttcgtgaaatctctccagcgaaatctagc
tttcacgcccaggcttgtgctcggacaaagaggtaccagtacaaactttttgtggctccg
gtcatggatccactcttgcgcttgtacgcttaccacgtacctgagaggctcgacgttgct
gctatggcggaagcttgcggctacttcgttgggaagcacgacttctcgacgtttagcaac
tcatcgacgctccggcccctgcaaaatcccgttcgagagatcttgcgtttcgatctgctg
gagcaggcaagcggtccagttctttgcttcgaaatcgaaggcacgggattcttccacaag
caaataagaaacatggtgggattgatcgttgcgatcggcaaaggagagcacgaggctcga
gtgattccagagctcttggctatgaaagatcgccaaaaactagctagagtttctatcact
gctccctcccgaggactcacgcttgtctccgtccactacgaccaaagcgatcttgacttg
ccggaaaatctactgtgtagaaagtaa
DBGET
integrated database retrieval system
