KEGG   Selaginella moellendorffii: SELMODRAFT_80012
Entry
SELMODRAFT_80012  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
smo  Selaginella moellendorffii
Pathway
smo03082  ATP-dependent chromatin remodeling
smo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SELMODRAFT_80012
   03083 Polycomb repressive complex
    SELMODRAFT_80012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_80012
Enzymes [BR:smo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     SELMODRAFT_80012
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     SELMODRAFT_80012
   HDAC complexes
    Sin3A-HDAC complex
     SELMODRAFT_80012
    BRAF-HDAC complex
     SELMODRAFT_80012
    REST complex
     SELMODRAFT_80012
    SHIP complex
     SELMODRAFT_80012
    MiDAC complex
     SELMODRAFT_80012
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     SELMODRAFT_80012
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SELMODRAFT_80012
  Chromatin remodeling factors
   NuRD complex
    SELMODRAFT_80012
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 9643773
NCBI-ProteinID: XP_002963181
JGI: 80012
UniProt: D8QXJ8
LinkDB
Position
Unknown
AA seq 410 aa
MDGSGNSLASGPEGRSKRVAYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIHNKLE
VLKPLPAKDRDLCRFHADDYVAFLRVITPETQHEHLRALKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYHARVLY
IDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDMGHAKGKYYSLNVPLNDGI
DDESYHSLFKPIITKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIKGHAQCVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETAVAVGVELEDKMPYNEYYEYFGPDYTLHVTPSNMEN
QNSAQYLESIRNRLLENLSNLQHVPSVPFQERPPDTDLPEEVSLSVASTW
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggatggaagcggcaactcgctcgcctcggggccggaggggcggagcaagcgcgtcgcc
tacttctacgaccccgaggtagggaactactactacggccagggccacccaatgaagccg
cataggatccggatgacccattccctcctcgtccactatggcattcacaacaagctcgag
gttctcaagcccctccccgccaaggaccgggacctctgccgcttccacgccgacgactac
gtcgccttcctccgggtcatcactcccgagacgcagcacgagcacttgcgcgcgctcaaa
cgattcaatgtgggcgaggactgcccggttttcgatggcttgtactcgttttgccagact
tatgccggtggatccgtcggtggcgctgtcaagctcaaccatggtcactcggacattgcg
gtgaattggtctggtggattgcatcacgcgaagaagtgcgaggcctcggggttttgctac
gtcaacgacattgttcttgccatcctggagcttctcaagtaccatgctcgagttttgtac
attgacattgatatacaccacggagatggtgtcgaggaggccttttacaccacagaccgt
gtcatgaccgtctccttccacaagttcggggactacttccccggaaccggggacgtgagg
gacatgggacacgccaaagggaaatactattctctcaacgtcccgctcaacgatggcatc
gacgatgagagctaccattctttgttcaagccgatcatcaccaaagtgatggaggttttc
cagccgggggctgtcgtgttgcagtgtggagccgactcgctgtccggggaccggcttgga
tgcttcaacctgtcgatcaaaggccacgctcagtgtgttaagttcatgcggtcttttaac
gttccgttgctgttgctcggaggcggaggctacacaatccgcaacgttgctcggtgctgg
tgttacgagactgctgttgctgtaggcgtggagctagaggataaaatgccatacaacgag
tattacgagtactttggcccggattacacgctccacgttactccgagcaacatggagaat
caaaactcggctcagtacctggagtccataaggaatcgactcctggagaacttatcgaat
ttacagcatgtaccaagcgtaccattccaggagagaccacctgatactgatcttccagaa
gaggtctccctctctgtggcttctacatggtga

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