Selaginella moellendorffii: SELMODRAFT_80089
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Entry
SELMODRAFT_80089 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00260
Glycine, serine and threonine metabolism
smo00400
Phenylalanine, tyrosine and tryptophan biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
smo01230
Biosynthesis of amino acids
Module
smo_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SELMODRAFT_80089
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
SELMODRAFT_80089
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
SELMODRAFT_80089
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
9643468
NCBI-ProteinID:
XP_002963667
JGI:
80089
UniProt:
D8QY28
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All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MHHRVLRLRLYDVPATRRLLSVRRCGSNTKVSLDEKDLPAKWYNITADLPQPPPPPLDPR
SLEPLKAEGMGALFPQELIRQEMSSDRYIGIPDEVLAVYKLWRPTPLFRAKRLERLLETP
ARIYYKYEGVSPAGSHKPNTAVPQAFYNAKEGIKRLTTETGAGQWGSALAFACSIFNLDC
EVWQVRASYDQKPHRKTMMETWGAKVYPSPSAITATGRKMLAEDPNCPGSLGLAISEAVE
VAVQDSNTHYALGSVLNHVLLHQTVIGEECLLQLAKAGETDVDILIGCTGGGSNFGGLAF
PFLREKFAGKMNPVIRAVEPAACPSLTRGVYAYDYGDTAGFTPLMKMHTLGHDFIPDPIH
AGGLRYHGMAPLISHLYNLKLMEAIAIPQKECFQGALQFARSEGIIPAPEPTHAIAATIR
EAERCRESGEAKVIVLALCGHGHFDLASYEKFLSGEIEDLDYSDEKAAAAMASIPVVKQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatagagttctccggctccggctgtatgatgttcctgctacgagaaggctgtta
tcggttagaaggtgtggcagcaacacaaaggttagtctggatgagaaggatcttccagca
aaatggtacaacattaccgcagatttgccgcagccgccgccgcctcctctggatcctaga
agcttggagccgttgaaagcagagggcatgggggctttatttccccaagaacttattcgc
caggagatgtccagcgatcgctacattggcattccagacgaggtcctcgcggtgtacaag
ctgtggaggccaacgcctctcttcagggccaagcgactagaacggttgctagaaactcct
gcaaggatatactacaagtacgagggtgtgagtccagcgggatcacacaagccgaacacg
gccgtcccacaggcgttttacaatgccaaggaaggaatcaagcgtctcaccactgaaact
ggtgctggacagtggggaagcgctctggcttttgcttgctcaatcttcaatctcgactgc
gaggtatggcaggttcgtgcatcttacgaccagaagccacacaggaagacgatgatggag
acgtggggagcgaaagtttacccctccccctcggctattacagccacgggccgcaaaatg
ctagccgaggatccgaactgtccgggaagcctgggccttgccatctctgaagccgtggaa
gttgctgtccaagactcgaacacgcactacgcactggggagcgtcctcaatcacgtcctt
ctccaccagacggtgatcggcgaggaatgcttgcttcagctggccaaagccggagagacc
gacgtggacatactcatcggttgcaccggcggcggatcgaactttggaggcttggctttc
ccgtttctgcgggagaagttcgcagggaagatgaatccggtgatccgagcagtcgagccg
gcggcttgtccatcactcacaagaggagtgtacgcttacgactatggtgacactgccggg
tttacgcccctgatgaagatgcatacgctcgggcacgactttattccagatcccatccat
gctggaggattgaggtaccatggaatggcaccgctgatatcacacctctacaatcttaag
ctcatggaggccatagctataccgcagaaagaatgcttccaaggagctctacaatttgct
cgaagcgaaggaataattccagcacctgagccaactcacgcgatcgctgctacgatccgt
gaagcggagcgatgccgagagagtggcgaggccaaagtgattgtcttggcactgtgcggc
cacggccactttgatctcgcctcgtacgagaagtttctgagtggagagatcgaagatctc
gactattccgacgagaaagccgcggcagcgatggcctccattcccgttgtcaagcagtaa
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