Selaginella moellendorffii: SELMODRAFT_80529
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Entry
SELMODRAFT_80529 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_80529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_80529
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SELMODRAFT_80529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9643661
NCBI-ProteinID:
XP_002963856
JGI:
80529
UniProt:
D8QWZ7
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MARQQRSTQALEEEPHRAPVFSSDGERIDGRHAQMCRAAFLRTGAVRAAAGSAYAESGDT
KVIVSVFGPRESKKAEAFSDAGRLNCNVKYCSFATPVRGKMGAANAEERDLSSMLYKSVV
GAVDLRTFPKTTVDVFALVLQSGGGDLPVIVTCASLALADAGIVLYDLVAAVSVSSIQGQ
VLLDPSTSEENCEDGSLMVAYMPSRKEITQVTMTGEWSSSRASESLDLCLDACAKIGDVM
RSCLKEAAAQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcagcagcgatcgacgcaggcgctggaggaagagccccatcgcgcccccgta
ttttccagcgatggagagaggatcgacgggcgccacgcacagatgtgccgcgcggcattc
ttgcgcaccggcgccgtccgggcggcggcgggatcggcctacgcggagtcgggcgacacc
aaggtgatcgtgtccgtgtttgggcctcgcgagagcaagaaggccgaggcattcagcgac
gctgggcggctcaattgcaacgtcaagtactgctccttcgcgacgcctgtgagagggaag
atgggcgctgccaatgccgaggagagggatctctcatcgatgctctacaagtctgtggtg
ggcgctgtggatcttcgaacgttccccaagaccaccgtcgacgtcttcgcgcttgttctt
caatccgggggtggcgatcttccggtgatcgtcacttgcgcatcgctcgctctagccgac
gcggggatcgtcttgtatgatctagtagcagcggtgtcggtcagtagtatccaaggccag
gtcctgttggatccctcgacgagcgaagagaattgcgaggatggtagtctcatggtggct
tatatgccctccagaaaagagatcacgcaagttaccatgaccggggaatggtccagctcc
agggcctcggaatcattggacctctgcttggatgcctgtgccaagattggcgatgttatg
agatcttgcttgaaagaggcagcagcgcaataa
DBGET
integrated database retrieval system
