Selaginella moellendorffii: SELMODRAFT_80645
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Entry
SELMODRAFT_80645 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_80645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_80645
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_80645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Utp13
EIF3I
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
9655231
NCBI-ProteinID:
XP_002963289
JGI:
80645
UniProt:
D8QY94
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MAPLGYKKNFRATPALQLFYTGGPLRLAPDASFLACACNDEVKIVDIATGTIRKSLAGDS
EAITALAISPDGNTLFAASRSLQVRIWDLATGTLCRSWKAHDGSVTDMDVSMSGLLATAS
IDRSIRVWDVDGGFCTHAFRGHKGIVTKVIFHPDPHRLLLFSGGDDATVRVWDLVTKKSA
ALLEKHFSTVTSLAVSANGWSLISGARDKVLNIWSLRDYSHEGTVPVFEAVEAICVVPDG
CNLPGSSIQKKKGSKPNVLTVGELGVIRVFSAEGGNCVYKQNSSDVSIATEDADETKRGF
TAAYILPDAKGVLCITYDHRLFFYEPFLVDDKQRDLRISKRLIGCNDEITDLRYVGSDET
SLAVASNVEQVRIYDLSSMACTQELTGHTDIVLCLDTCLSSQGKSVLASGGKDHTARLWD
VTSGKCFAMCTGHSAAVGAIAFSKKKRSFLLTGSRDRSIKFWDFQFVIDDNQQDRVAKLS
CIRSAAAHDKDINSLSVAPNDSLLCSGSQDGTARIWKLPELTLATTLKGHKRGVWSVEFS
PIDQCVLTSSGDKTIRIWALSDGSCLKTFEGHTASVLRASFLSRGTQIISSGADGLVKLW
TIKSNECINTFDQHNDKIWALAVNSNNESFATGGGDALVTLWEDCTASDEEEAARQEAEE
ALKDQDLANALADTDYDKAVQLAFELRRPFKLLGVFTDLGAFGRSGTDATLASLLKKLDS
AYLRLLLEYIREWNSKPKFCYVAQHVLHCVFNVFPASEIVEVPGISELLEGILPYTQRHF
NRIGRLEQSCYLADYTLACMSVLDPSDQLPGLGGEIHAKKKQKL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgttaggatacaagaaaaatttccgggcgacgccggcattgcagctcttctac
acgggagggccgctgcgtctcgcgccggatgcctcgttccttgcctgcgcttgcaacgat
gaggtcaagatcgtcgacatcgccaccggcaccattcgtaagtctctagcaggcgattcc
gaggctatcacagcattggcgatcagtcccgatggaaatacgctcttcgcggccagcagg
agcttgcaagtgaggatctgggatctcgccactggcacgctttgtcgatcgtggaaggca
cacgatgggtctgtgactgacatggacgtatcgatgtcggggcttctagccacagccagc
attgatcgaagcattcgagtgtgggatgtggatggaggattttgtacgcacgcgttccgg
gggcacaaaggcatcgtcacaaaagtgattttccatccggacccgcatcgtttgctgctc
tttagtggcggtgacgatgccacagtacgggtgtgggatctggtgacgaaaaaatctgcc
gctcttttggagaagcatttctcgactgtcaccagcttggcagtttcagcgaatggctgg
agcttgattagtggtgcgagggataaggttctaaatatttggagtcttcgtgactatagc
catgaaggaactgtaccggtatttgaagcagtggaagcaatctgtgttgttccagatggc
tgcaatctaccaggaagctctatccagaagaagaagggctcgaagccgaatgtgttaact
gttggcgagcttggagttatccgtgttttctctgccgaaggtggaaattgcgtatacaag
caaaattcttccgatgtttccatagcaacagaagacgcggacgagacaaagcgtgggttt
actgcggcatatattcttccagatgcaaaaggagttctttgcatcacgtacgatcaccgc
cttttcttttacgagccatttctagtggacgacaagcaaagagatttgcgcatcagcaag
cgccttataggttgcaacgatgaaataaccgatttgagatatgttggaagcgacgagact
tctcttgccgtggccagcaacgtggagcaggtccgcatttacgacttaagctccatggcc
tgcacacaagagctcaccggtcacacggacattgtcctttgtctggacacttgcctttca
tctcaaggaaaatcagtgctagcttcgggtggtaaggaccatacggcgagactttgggat
gttacctctggtaaatgtttcgcgatgtgtactggccacagtgctgcagtcggagccatt
gccttttcaaaaaagaaacgcagttttctgctgacaggaagcagggatcgctctatcaag
ttctgggactttcagtttgttatagatgacaatcaacaagatagagttgccaagctttcg
tgtatccgttctgccgctgcacatgacaaagatatcaactcgctttctgtggctcccaat
gacagccttctatgcagcggatctcaggacgggacagctcgtatttggaagctcccggaa
ctcactctagctacgactttgaaagggcacaaacgaggcgtctggtctgtagagttttct
cctatcgaccagtgcgtattaacgtcctccggcgataaaactatacgaatatgggcactc
tccgacggttcttgtctaaaaacatttgagggccacaccgccagtgttttgagagcttca
tttctatctcgcggaacacaaataatttcttctggtgcggatggactggtaaagctatgg
actatcaagagtaacgagtgcataaacacttttgatcaacacaacgacaagatttgggcc
ttagccgtgaacagcaacaatgaatcgtttgctactggagggggtgatgcattggtcact
ttgtgggaggattgcaccgcctctgacgaagaggaagctgctagacaagaggccgaggaa
gctctgaaagaccaggatttagcgaatgccctcgcggacacggattatgacaaagcggtt
caactggcattcgaactaagacgaccttttaaactccttggagtttttacagatctcggt
gcttttggcagatctggcacagacgcaacactggcctcgcttttgaagaaactcgacagc
gcatacctgcgtctactcttggaatatatccgcgaatggaattcgaagccaaagttttgt
tatgttgcgcagcatgtgttgcactgcgtattcaacgtttttccagcgtccgaaatagta
gaggttccagggatatcggagcttttggaaggcattttaccttatacacaacggcatttt
aataggataggcaggctggaacaaagctgttaccttgcggactatacgttggcatgcatg
tcagtgttggatcccagtgaccaattgccaggacttggcggagagatacatgctaagaag
aagcaaaagttgtaa
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integrated database retrieval system