KEGG   Selaginella moellendorffii: SELMODRAFT_80645
Entry
SELMODRAFT_80645  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
smo  Selaginella moellendorffii
Pathway
smo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SELMODRAFT_80645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_80645
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SELMODRAFT_80645
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd WDR55 Utp13 EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_IP5PC_F WD40_like Beta-prop_WDR75_2nd Beta-prop_DCAF12 Polysacc_lyase-like
Other DBs
NCBI-GeneID: 9655231
NCBI-ProteinID: XP_002963289
JGI: 80645
UniProt: D8QY94
LinkDB
Position
Unknown
AA seq 824 aa
MAPLGYKKNFRATPALQLFYTGGPLRLAPDASFLACACNDEVKIVDIATGTIRKSLAGDS
EAITALAISPDGNTLFAASRSLQVRIWDLATGTLCRSWKAHDGSVTDMDVSMSGLLATAS
IDRSIRVWDVDGGFCTHAFRGHKGIVTKVIFHPDPHRLLLFSGGDDATVRVWDLVTKKSA
ALLEKHFSTVTSLAVSANGWSLISGARDKVLNIWSLRDYSHEGTVPVFEAVEAICVVPDG
CNLPGSSIQKKKGSKPNVLTVGELGVIRVFSAEGGNCVYKQNSSDVSIATEDADETKRGF
TAAYILPDAKGVLCITYDHRLFFYEPFLVDDKQRDLRISKRLIGCNDEITDLRYVGSDET
SLAVASNVEQVRIYDLSSMACTQELTGHTDIVLCLDTCLSSQGKSVLASGGKDHTARLWD
VTSGKCFAMCTGHSAAVGAIAFSKKKRSFLLTGSRDRSIKFWDFQFVIDDNQQDRVAKLS
CIRSAAAHDKDINSLSVAPNDSLLCSGSQDGTARIWKLPELTLATTLKGHKRGVWSVEFS
PIDQCVLTSSGDKTIRIWALSDGSCLKTFEGHTASVLRASFLSRGTQIISSGADGLVKLW
TIKSNECINTFDQHNDKIWALAVNSNNESFATGGGDALVTLWEDCTASDEEEAARQEAEE
ALKDQDLANALADTDYDKAVQLAFELRRPFKLLGVFTDLGAFGRSGTDATLASLLKKLDS
AYLRLLLEYIREWNSKPKFCYVAQHVLHCVFNVFPASEIVEVPGISELLEGILPYTQRHF
NRIGRLEQSCYLADYTLACMSVLDPSDQLPGLGGEIHAKKKQKL
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcgccgttaggatacaagaaaaatttccgggcgacgccggcattgcagctcttctac
acgggagggccgctgcgtctcgcgccggatgcctcgttccttgcctgcgcttgcaacgat
gaggtcaagatcgtcgacatcgccaccggcaccattcgtaagtctctagcaggcgattcc
gaggctatcacagcattggcgatcagtcccgatggaaatacgctcttcgcggccagcagg
agcttgcaagtgaggatctgggatctcgccactggcacgctttgtcgatcgtggaaggca
cacgatgggtctgtgactgacatggacgtatcgatgtcggggcttctagccacagccagc
attgatcgaagcattcgagtgtgggatgtggatggaggattttgtacgcacgcgttccgg
gggcacaaaggcatcgtcacaaaagtgattttccatccggacccgcatcgtttgctgctc
tttagtggcggtgacgatgccacagtacgggtgtgggatctggtgacgaaaaaatctgcc
gctcttttggagaagcatttctcgactgtcaccagcttggcagtttcagcgaatggctgg
agcttgattagtggtgcgagggataaggttctaaatatttggagtcttcgtgactatagc
catgaaggaactgtaccggtatttgaagcagtggaagcaatctgtgttgttccagatggc
tgcaatctaccaggaagctctatccagaagaagaagggctcgaagccgaatgtgttaact
gttggcgagcttggagttatccgtgttttctctgccgaaggtggaaattgcgtatacaag
caaaattcttccgatgtttccatagcaacagaagacgcggacgagacaaagcgtgggttt
actgcggcatatattcttccagatgcaaaaggagttctttgcatcacgtacgatcaccgc
cttttcttttacgagccatttctagtggacgacaagcaaagagatttgcgcatcagcaag
cgccttataggttgcaacgatgaaataaccgatttgagatatgttggaagcgacgagact
tctcttgccgtggccagcaacgtggagcaggtccgcatttacgacttaagctccatggcc
tgcacacaagagctcaccggtcacacggacattgtcctttgtctggacacttgcctttca
tctcaaggaaaatcagtgctagcttcgggtggtaaggaccatacggcgagactttgggat
gttacctctggtaaatgtttcgcgatgtgtactggccacagtgctgcagtcggagccatt
gccttttcaaaaaagaaacgcagttttctgctgacaggaagcagggatcgctctatcaag
ttctgggactttcagtttgttatagatgacaatcaacaagatagagttgccaagctttcg
tgtatccgttctgccgctgcacatgacaaagatatcaactcgctttctgtggctcccaat
gacagccttctatgcagcggatctcaggacgggacagctcgtatttggaagctcccggaa
ctcactctagctacgactttgaaagggcacaaacgaggcgtctggtctgtagagttttct
cctatcgaccagtgcgtattaacgtcctccggcgataaaactatacgaatatgggcactc
tccgacggttcttgtctaaaaacatttgagggccacaccgccagtgttttgagagcttca
tttctatctcgcggaacacaaataatttcttctggtgcggatggactggtaaagctatgg
actatcaagagtaacgagtgcataaacacttttgatcaacacaacgacaagatttgggcc
ttagccgtgaacagcaacaatgaatcgtttgctactggagggggtgatgcattggtcact
ttgtgggaggattgcaccgcctctgacgaagaggaagctgctagacaagaggccgaggaa
gctctgaaagaccaggatttagcgaatgccctcgcggacacggattatgacaaagcggtt
caactggcattcgaactaagacgaccttttaaactccttggagtttttacagatctcggt
gcttttggcagatctggcacagacgcaacactggcctcgcttttgaagaaactcgacagc
gcatacctgcgtctactcttggaatatatccgcgaatggaattcgaagccaaagttttgt
tatgttgcgcagcatgtgttgcactgcgtattcaacgtttttccagcgtccgaaatagta
gaggttccagggatatcggagcttttggaaggcattttaccttatacacaacggcatttt
aataggataggcaggctggaacaaagctgttaccttgcggactatacgttggcatgcatg
tcagtgttggatcccagtgaccaattgccaggacttggcggagagatacatgctaagaag
aagcaaaagttgtaa

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