Selaginella moellendorffii: SELMODRAFT_81531
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Entry
SELMODRAFT_81531 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_81531
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
SELMODRAFT_81531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
9654107
NCBI-ProteinID:
XP_002964638
JGI:
81531
UniProt:
D8R0H0
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MKQCSELGKLWERQIGNIHPRAFSLNIGGCKDLIQRLERYAELSGHDGCVNTVHFNPSGD
ILVSGSDDKEIVFWDWAARSKKLSFNSGHDNNVFQARIMPFSNDRSVVTCAADGQVRHAV
IPENGCVSTKKLAQHRGRAHKLAIEPGSPRTFFSCGEDGDVRQFDLREGSNMKIVTCKGR
PVIYLNAIVINPRNPNYFAVGGSDEFARVYDIRKVSSSGEVDSPVDVFAPKHLIGTKQHV
HITCVAYSQQEELLISYNDELIYLFDKGGGLGPSPPRDQNEENEKKEYEVYKGHRNAQTV
KGVNFFGPNCEYVVSGSDCGNIFIWKKRGAELVAMMEGDRQVVNCLEPHPSVTVLATSGM
DDSVKIWAPTAPAIQPLPKNAHKVRENPSFL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtgctctgaattgggcaagctatgggagcggcagattggcaatatacatccg
cgagcattctccttaaacattggcggttgcaaggatttaatccagcgtttggagcgctac
gctgagctctctggccacgatggatgcgtcaacactgtgcattttaatcccagcggagac
attctcgtctctggatccgacgacaaagagattgtgttttgggactgggctgctcgctcc
aaaaaactctcttttaactctggccatgacaacaatgtgttccaggccaggatcatgcct
ttctccaacgatcgaagcgttgtgacctgtgctgccgatggccaagtcaggcatgctgta
atccctgagaatggttgtgttagcacaaagaagctggcacagcaccgagggcgagctcac
aagcttgccatcgagcctggaagcccgagaacattttttagctgtggagaagatggcgat
gttcgtcaattcgatttgcgagagggcagcaacatgaagatcgtcacttgcaaggggcgt
cccgtgatctacctcaacgccattgtcatcaacccgcgcaacccaaactatttcgccgtg
ggaggatccgacgagtttgctcgagtctacgacatccgcaaggtcagctccagcggcgaa
gtggattcccccgtcgacgtcttcgctccaaagcacctcatcggcaccaagcagcacgtc
cacattacatgcgtcgcgtactcccagcaagaggagctcctcatctcctacaacgacgag
ctcatctatctctttgacaaaggtggaggactcggcccttctccgccaagagatcaaaac
gaggagaacgagaagaaagagtacgaggtttacaagggccacaggaacgcgcagaccgtc
aagggcgtcaactttttcggtccaaactgcgagtacgtggtcagtggctccgactgtggc
aacatcttcatctggaagaagcgaggcgcggagctcgtcgcgatgatggagggcgatcgc
caggtcgtcaattgtctggagccgcatcccagcgtcaccgttcttgccaccagcggcatg
gacgacagtgtcaagatctgggctcccacggctccagcgatccagccgcttccaaagaac
gctcataaggtacgtgaaaatccttcttttttgtga
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