Selaginella moellendorffii: SELMODRAFT_82087
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Entry
SELMODRAFT_82087 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_82087
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_82087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_82087
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_82087
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SELMODRAFT_82087
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SELMODRAFT_82087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Cortex-I_coil
WWC1
Motif
Other DBs
NCBI-GeneID:
9655603
NCBI-ProteinID:
XP_002964386
JGI:
82087
UniProt:
D8QZ32
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
LYEKNHYLKAIKTCKDFKSKYPDIELVPEEEFFRDAPEELQSDPAIKNDPHKLMLQRLNF
EMHQRKQLCKQRELLEARKKMLQENIANRKKFLSSLPSQLKALKKASLPVQQHLGILHTK
RLKQHQLADLLPSPLYILYVQLMSYKEAFGEPIDVEIIGSAKEAQAFLKQSTNRESGPGS
FDEQHKADDEVLDDDDESQRRRKRTKRTHDVEAAADAGVLHAHPLSVILQIYDDDDRGGE
KAAKLLTLKFEYLPRLNVVCAGVEGHQDSDVHLLANLFPDDAGVTLPNQAGKILAENKLV
EDPKRTSRWYKWAQHLAGIDFLSETPQYLCHQETAEVIKTSISSGLAVYRQQHRVQTVLQ
QLRNRKKSQLALKGQLDSLEKLAIPPLKFKAVHWATHVPKCLLKRWTQASVVETLALESE
AGREDGELPPAAISKPASSNEKGASSKKTARFEAPEAQLPAPRQDALQPRQIDLELSIFS
SAEFADEEMEECEPDVPEGKDVDLSCSKQSWKDYGSRAFNAVLRRDDDASGRAFELEAQV
TIAMDYPARPPLFQLRLLSGSTQCFHHPPSAGVVDVTEARIQGSDWFNELRAMEAKINCQ
VLEKLPEWEEDSVLAHQMALLAYLFDTEVDGELASSLRRMDSTTRLHRGRDRRIDLNL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ctctacgagaagaaccattacctcaaggcgattaagacgtgtaaggatttcaagtcgaaa
tatcccgacatagagctcgttcccgaggaagagttcttccgggatgcgccggaggagctc
cagtctgatcctgccatcaagaatgatccacacaagcttatgctgcagcgtctcaacttt
gagatgcatcagagaaagcaactatgcaagcagcgggaactactagaagctcgcaagaaa
atgctgcaagagaacattgcaaaccggaagaaattcctctcgagcttgccatcccaactc
aaggctctcaaaaaggcttctttgcctgtccaacaacaccttgggatcttgcataccaag
cgcttgaagcagcatcagcttgcggacttgcttccttctcctctttatatactttacgtg
cagctcatgtcgtataaagaggcctttggagagccgattgacgtcgagatcatcggaagc
gctaaagaagctcaagcattcttgaagcaaagtacaaaccgagaatcaggtcctgggtct
ttcgatgagcaacacaaagcagacgatgaagtactggatgatgatgacgagtctcaacgc
cggaggaaaagaactaagagaacacatgatgtggaagctgctgctgatgcgggcgtactg
cacgcccatcccctgtcagtcattctccagatctatgacgatgacgatcgaggaggggag
aaagccgctaagctacttactctcaaattcgagtatctgcccaggttaaacgtcgtttgt
gctggagttgaaggacatcaagatagtgatgttcatctccttgccaaccttttccccgac
gatgcaggagtcaccttgccgaaccaggccggaaaaattcttgctgaaaataagctggtg
gaggacccaaaacgaacatcaagatggtataagtgggctcaacatttggcaggcattgac
ttcctctctgagacgccacaatatctatgtcatcaggagacagcagaggttatcaagacg
tccatatcctctgggctagccgtctacaggcaacagcatcgcgtgcaaactgttttgcag
caacttcggaacagaaagaagtcccagctggccttaaagggccaacttgactcgttggaa
aaattggctattccgcctctcaagttcaaggccgtgcattgggcaactcatgtaccaaaa
tgcctgctcaagcgctggacgcaagcgtccgtcgtggagacactggcactggaaagtgaa
gctggtagagaggatggcgagcttcctccagccgctatatcgaagccggcgtcttcaaac
gaaaaaggagccagctcaaaaaagaccgctcgctttgaggctccggaagctcagctcccg
gccccaaggcaagatgcactacaaccacggcaaatcgatctcgagctgtcgatcttttct
tcggccgagtttgcggacgaagaaatggaggagtgtgagccggatgtcccggaaggaaag
gacgtagatctgagctgctccaagcagagctggaaggattatggctctcgtgctttcaat
gctgtactaaggagagacgacgatgcttcaggacgggcgtttgagctcgaagcacaggtg
acgatagctatggactaccccgcgcgtcctccactcttccagctgaggctcttgtccgga
agcactcaatgctttcatcatccaccttccgcaggggtagtggacgtgacggaagcacgc
attcaaggctcggactggttcaatgagctacgcgcaatggaagccaagataaactgccag
gttttggagaagctcccagagtgggaagaagacagcgtcctagcgcatcaaatggcactc
ttggcctatctctttgacaccgaggttgatggagagctggcgagcagcctaagaaggatg
gatagcacgacgcgattgcatcgaggtagagacaggagaatcgatctcaatctgtaa
DBGET
integrated database retrieval system
