KEGG   Selaginella moellendorffii: SELMODRAFT_84906
Entry
SELMODRAFT_84906  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_84906
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SELMODRAFT_84906
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_EML WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_VPS8 TRM82_WD ASA1 WD40_MABP1-WDR62_2nd PAC11 Beta-prop_WDR41 DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 TPR_14 Beta-prop_IP5PC_F Beta-prop_IFT140_1st TPR_2 TBK1_CCD1 TPR_1 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 9636038
NCBI-ProteinID: XP_002965623
JGI: 84906
UniProt: D8R433
LinkDB
Position
Unknown
AA seq 695 aa
MEDTLQEFKDFCSSQGHNGCVNSLAWNTTGSLLLSGSDDTRVNVWDYNTRKLLQSVDSGH
IANIFCTKFLPASGDDIVVSGAGDSEVRIHRRSRVAATGSSEPFGLFRCHSKRVKKLAVE
EGNPHLIWSASEDGTLRQHDLRQSVTCGAEQECRNILLDLRNGAKKTLSDPPKGSFALKS
CSINPTRPHQILIGGSDSFARLYDRRMLPPLTPSGQQSKPPACVCYYCPMHLSDRASLHL
THVTFSPDGGEVLLSYSGEHVYLLDAYNGNDASVVYAAGDVPRRTALVPIVNGQQYKVPS
TQEVPSGNKRECKELLEEARRALEEGNSFCAIETTSEVLETTGVVLEPQLRHDLLCLRAG
AFVKRGWKNDMHMAVRDSNAARLIDPMSVVAHHRMAEALSQLGRHKEAWEFATRAHHLDP
EDGTLSDHVTQLHAKLVAAEQARNVWNNEETKPERRPSRIQSLREFLFRQEQDHSDSSDE
SRRAERYDSDLEEEDMEMEIEMSVTEDNDRDRESGAPSSLNLRVRRKCDGVREKQANTVA
LGAPELQTDIAMDMRQRYVGHCNTGTDIKQASFLGERGKFVASGSDDGLWFIWEKETGRF
VTMLAGDDSVVNCIQCHPHDCLVATSGIDNTIKLWSPSSNTEARRAKGADSDALRIMADN
QQQMRRHREIGLPIELLQRIRGVEAAVHPFECTQS
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggaagatactttgcaggaatttaaagatttttgttcttcacagggtcacaatggatgt
gtgaattctttggcgtggaacacgactggttccttgttactctcgggctctgatgacaca
agggtgaatgtttgggactataacacacggaagctcctacaaagtgttgattccggtcac
atcgccaacattttttgcacaaagttcttaccggctagcggggacgacattgttgtgtct
ggagccggtgattcggaggtgaggatacacagacggagtcgtgtggctgctactggaagc
agtgagccatttggactcttccgttgtcattccaagcgcgtgaagaaactggctgttgaa
gaaggaaatccacacttaatctggagtgccagtgaagatggtactcttaggcaacacgac
ttacgccagtccgtgacgtgcggagcggagcaggaatgccgtaatattctcctcgattta
agaaatggagcgaaaaaaaccctgtctgatcctcccaaaggatcttttgctctgaagtca
tgctctataaatccgacccgtccgcatcaaattctcattggtggcagcgattcatttgcc
cgtctgtacgatagaaggatgcttccgccactgactccatctggccagcaatctaaacca
ccagcatgcgtttgctattactgtccaatgcatctttctgatcgtgccagtttgcacctt
acacatgttacgttcagccctgatggcggcgaggtacttttgagctacagcggagaacac
gtctacttgttagatgcgtacaatgggaatgatgctagcgttgtctatgctgccggtgat
gttccgagaaggactgccttagtccctatcgtgaatggtcaacagtataaagtaccctca
acacaagaagtgccttcaggcaataaaagagaatgcaaggagctcttggaagaggcacgg
agagccttagaagaaggaaattcattctgtgcgattgaaacgacaagtgaagttcttgaa
actactggagttgtcctagaaccacagcttcggcatgatttgctgtgccttcgcgccgga
gcttttgtgaagagaggatggaaaaacgacatgcatatggctgttcgcgatagcaatgca
gctcgacttattgatcccatgtcagtagtggctcatcacagaatggccgaggcactttct
cagttagggagacataaggaagcgtgggagttcgcaacgagagctcaccatctcgatcct
gaagatggtactctttccgatcatgtgacgcagctgcatgcgaagcttgttgctgccgag
caagctcggaacgtctggaataacgaagaaacaaaaccggagagacgcccttcaaggatt
caatccttgagagaatttttatttagacaggaacaagatcacagtgattcttcagacgaa
agcaggagagcagaaagatatgactctgatcttgaagaagaggacatggagatggagatc
gagatgtccgtcactgaggacaatgatcgagaccgagaaagcggagcccctagtagtttg
aacttaagagttcgaagaaaatgtgatggtgttcgagagaagcaggcaaatacggtggct
ttaggagcaccagaactacaaacggacattgctatggacatgcggcagcgatacgtgggg
cattgcaacaccggaacagacatcaagcaggcgagctttctcggagaaagagggaaattc
gttgcgagcggtagtgacgatggcctgtggtttatctgggagaaagaaactggaagattt
gtaacgatgctagccggagacgatagcgttgtaaattgtatacagtgccatcctcatgat
tgcttggtggcaacgagcggcattgacaacactattaagctctggtcacccagttctaat
actgaagctcggcgtgccaaaggagccgactctgacgctcttcgcatcatggccgacaac
caacaacagatgcgccgccatcgtgagattggattgccaatagaacttctccagcggatt
agaggagtagaagccgctgttcatccgttcgagtgtacacaaagctag

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