Selaginella moellendorffii: SELMODRAFT_85179
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Entry
SELMODRAFT_85179 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_85179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_85179
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SELMODRAFT_85179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
WDR55
DUF6657
Acyl-ACP_TE
Motif
Other DBs
NCBI-GeneID:
9652815
NCBI-ProteinID:
XP_002966234
JGI:
85179
UniProt:
D8R655
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MEDAVDDPKLPELKLDAKQAQGFIKFFRKLPEDPSVIRFFDRRDYFTAHGDNASLIARLY
YRTTTALRQLGSGSDTLSSVSISKSMFEVITRDVLLEKTEYNVELYEGSGANWKLAKSAT
PGKLGSFEDVLFSSIDMHDTPVVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQY
TNLESALLALGCRECVLPAENAKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSR
LIKSTSVEELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDVAA
LRALHVLESKNDPNKNSTLFGLMNHTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMF
VEDAELRESLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVIKDALERYEGE
FASAVEERYVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKADR
DTVEEEIREAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITLE
TRKDGIKFTTSKLRRLSERYGSLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAELD
VLLSFADLAVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLVIRGKS
WFQIITGPNMGGKSTYIRQIGVNILMAQVGCFVPCDRAEISIRSCIFARVGAGDCQLRGV
STFMAEMLETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFAT
HFHELTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFGI
HVAEFARFPECVVVLAKQKAAELEDFSPQAILEDEGDAGSKRKRSSSSSSSSGDKGWKFL
KGFAALPLDQMSHEHALKKVQELKAEFLDDLPVNTLEAVA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcagtggatgatcccaagctgccggagctcaagctagatgcgaagcaagct
cagggtttcatcaagttctttcgcaagctgccagaggatccatcagtgattcggttcttc
gatcgacgggactatttcactgcccacggggacaatgctagtcttatcgccaggctctac
tatcgaaccacgaccgctcttcgtcagcttggatctgggtctgatactctctccagcgta
agcatcagcaagagcatgtttgaggtgatcactcgggacgtcctgctggagaagaccgag
tacaacgtggagctctacgaaggcagtggagcaaactggaagctcgcaaagtccgcaact
ccgggaaagcttgggagcttcgaagacgtcttgttctcgagcatcgacatgcacgacacg
ccggtggtgatggcagtctggacagtcgcccgtgatcaagagcagctcgtcggcatagcc
ttcacggacatgacgagaaggacgctgggtacactagagtttctagacgacgatcagtac
acgaacttggagtcggctctcctcgctctgggatgccgggagtgcgttcttcctgcggaa
aatgccaagagcgtcgacggtcggaggctccgagacgtgctcgctcgatgcaacgtgcga
ctgactgagaagaagaaggcggagtttaagtcgcgagacatcgagcaagatctaagccgg
cttatcaagagtacatcggttgaggagctccgagaactcgttgtcaagtatgaagttgcg
tcagcggcattagcagctctacttgcgtacacggatatcttcgcagatgacagcaatcac
gggaagtatagacttcagcagtacagcctcgacagatacatgcggctggacgtggccgca
ttgcgagcgctgcacgtactcgagtccaagaatgatccgaacaagaactcgaccctcttt
ggactgatgaatcacacgtccactgctgggatgggcaagaggctactgaacaggtggctg
aagcagcctctacttgacgttgatgagatcaagcacaggcatgacgtcgtccagatgttt
gtagaagacgccgagctgcgggaaagtttaaagaactgcctcaaacgtgtgccggatgtt
gagcgcctgacgcggaagctcgagaggtcgagagctacgttgcaagacctcgtgaagctt
tatcaggtaagtgttcgtctctccgtcatcaaagatgctcttgaacgttatgaaggcgag
tttgcgtccgccgtcgaggaaaggtacgtcgttccgttgagagagtggacgcttgctgaa
catctcggaagatacgacgcactgatcgaaagcgccatcgacctggatcaaatcaagaat
ggcgagtacatcatttcggcatcatatgacagcagcttaaaaaccatcaaagctgaccgt
gataccgtggaggaagagatccgtgaagctcatgaacaagccgcgaacgatttggatctt
cctgctgataagtcgctgaagctggacaaaacgacgcagtgggggcacgtattcaggatc
acgaagaaggaggagcctaaagttcgcaagaaacttgcggtgcaatacatcaccttggaa
actcgaaaggatgggataaagttcacgacttccaagcttcgaaggcttagcgaaagatat
gggagcctgacagaaaattacaccaacactcaaagggatcttgttaagaggctggttcag
gtttcacagagctacgttgagatttttaatggtgcggcaaacctgctggcggaactggat
gtcttgttaagctttgcggatctggctgtaagcagtcctacgccttacgtaaggcctatt
atcactggacagaatgagggcgatattatcttggagggaagcaggcatccttgcgtagaa
gctcaagatgacgtgaacttcatcccaaatgattgtcgcctggtaattcgaggcaagagc
tggtttcaaatcatcactgggccaaatatgggaggcaaatcaacatatatccgtcagatt
ggtgtgaatatcttgatggctcaagtcggctgctttgtgccctgcgatcgtgctgaaatc
agcatacgaagttgtatcttcgcccgggttggagcaggagactgccagttgcgtggtgtt
tcaacgtttatggcagagatgctcgaaacctcggcgatattaaaatctgcaactgagact
tctctaataattgttgacgaactcggccggggtacctcgacttacgatggatttggtctg
gcttgggcaatctgtgagtacatagtggatgtgactagagcgccaactctatttgcaacg
cacttccacgagctcacgtccatttctcatcgtcaaggtccatcagctcacggtcccagc
aaaggtcctcctgtaggaatctccaactttcacgtgagcgcacacatagatcccagctct
cgaaagctcacaatgctttacaaggttgaagatggcccttgcgaccagagcttcggcata
cacgtcgcggaattcgctcgatttccagaatgtgtcgtcgtgctcgccaagcaaaaggct
gccgagctcgaagacttctcgccacaggcgattctggaggacgaaggcgacgctggaagc
aagcgaaagagaagcagcagtagcagcagcagcagcggggacaaaggctggaaattcctc
aaaggctttgctgcgttgccgctggatcagatgagccacgagcacgccttgaagaaggtc
caggagctcaaagccgagttcctggacgaccttcccgtcaacactctagaagcagtagcg
taa
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