Selaginella moellendorffii: SELMODRAFT_85554
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Entry
SELMODRAFT_85554 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_85554
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_85554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_85554
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_85554
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_85554
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_85554
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_85554
Exosomal proteins of bladder cancer cells
SELMODRAFT_85554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-GeneID:
9652372
NCBI-ProteinID:
XP_002966250
JGI:
85554
UniProt:
D8R691
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAGLAPETSQFDPRQYDQKMEFALEGDDVISSWDEVNETFDSMGLHENLLRGIYAYGFEK
PSTIQQRGIVPFCKGIDVIQQAQSGTGKTATFCSGILQQLDYNNVECQALVLAPTRELAQ
QIEKVMRALGDYLQVKVHACVGGTDVRQDQRILQAGVHVVVGTPGRVYDMLRRRALRPDY
IKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGLFSATMPPEALEITRKFMNKPVRIL
VKRDELTLEGIKQFYVNVEREDWKLDTLCDLYETLAITQSVIFCNTRRKVDWLTDKMRSR
DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN
YLHRIGRSGRFGRKGVAINFMVREDERMLHDIQKFYNTVIEELPNNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttggcacccgagacctctcaattcgatccccggcagtatgaccagaagatg
gagtttgcgttggaaggagacgatgtgatatcgagctgggacgaggtgaacgagacattc
gactccatgggcttgcacgagaatctgctgcgagggatctacgcctacggctttgaaaag
ccctctaccatccagcagaggggaatcgtgccgttttgcaaggggatcgacgtgatccag
caggcccagtccggcaccggcaagacggccacgttttgctccggcatcctgcagcagctc
gactacaacaatgtcgagtgccaggcgctggtgctggcgcccaccagggagctggcgcag
cagatcgagaaggtgatgcgggcactgggtgactacctgcaggtgaaggtgcacgcctgc
gtcggcggcaccgacgtccgccaggaccagagaatcctgcaggccggcgtccatgtggtg
gtaggcactcctggtcgcgtctacgatatgctcaggcgtcgcgcgctgcggccggactac
atcaagatgtttgtcctggacgaggcggacgagatgctgtcccgcggtttcaaggaccag
atttacgacatcttccagctccttccctccaaggtccaggtgggcctcttctccgccaca
atgccgcccgaggcgctggagatcacccgcaagttcatgaacaagccggtgcgcattctc
gtcaagcgagacgagctgacgctggagggtatcaagcagttttacgtgaacgtggaacga
gaggactggaaactggacacgctgtgcgacctgtacgagacgctggccatcacgcagagc
gtcatcttttgcaacacccggcgcaaggtggactggctcaccgacaagatgaggagccgc
gaccacaccgtgtctgcgacgcacggcgacatggaccagaacacccgcgacatcatcatg
cgcgagttccggtcgggctcgtcccgcgtgctcatcaccaccgacttgctcgcgcgcggc
atcgacgtccagcaggtgtcgctggtgatcaactacgaccttccgacgcagccggagaat
tatctgcatcgaattggtcgcagcggtcggtttgggcggaagggcgtggccatcaacttt
atggtgagagaggacgagaggatgcttcatgacatccagaagttttacaacactgtcatt
gaggagctgccaaacaacgtcgcggacctcatctaa
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