Selaginella moellendorffii: SELMODRAFT_85610
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Entry
SELMODRAFT_85610 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_85610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_85610
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SELMODRAFT_85610
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_85610
Exosomal proteins of bladder cancer cells
SELMODRAFT_85610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
9652206
NCBI-ProteinID:
XP_002966115
JGI:
85610
UniProt:
D8R5F4
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQLWDYRMGSLIDRFDEHDGPVRGVHFH
RSQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYIRTVQFHQEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHVKEDLVVSASLDQTVRVWDISALRKKTVSPAEDLLR
LTQMNSDLFGGGDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHVNNVSCVMFHARQDIIVSNSEDKTIRIWDMSKRSGVHTFRREHDRFWILSGHP
EMNLLAAGHDSGMIVFKLERERPAYTVSGGVLYYVKERHLRTYDFATGKDNPLIAIRRPG
STGMNQAPRTMSYNPAENAVLLCSDVDNGSYELYVISKDSIGKNDTQEAKKGSGSSAVFV
ARNRFAVLDKAHNLIVVRNLRNELSKKVDAPAPTVDAIFYAGTGTLLCRSDDKVILFDIQ
QKSILGEINSPQVKYVVWSQDMEAVALVSKHSIVMATKKLALKCSVHETIRIKSAAWDET
GVFIYTTLNHIKYCLPNGDSGTIMTLDVPIYITRVAGDKVYCLDRDGKVRTITIDTTEFT
FKLALIQKRYDRVLEMIRSSQLCGQAIISYLQQKGFPEVALHFVKDERTRFNLAIECGNI
EVAVVSAKEIDEKDYWYRLGVEALRQGNHEIVEYAYQRTKNFERLSFLYLITGNLEKLSK
MLKIAEMRNDVMGCFHNALYLGDVEERVKLLEKSGHLPLAYAAAKVHGLDEVAERLATEL
GDKVPQIPKLETSKLLLPPSPILRDNNWPLLLISKGFFEGAFAEPGVVDQEEENAPDAWG
DELVIPSGDAQAGAAEAEDLEEAGRAGPGAEGEEEGGWELEDLELPPEVVQPVESLTYGL
ERNWSDSSPPNVRNGPALIYKLPALEDRAKQAYKATTEGKFSEALRLFLSILHTVPVIVV
DSRKEVDDVKDLIGKSKEYVLTLKMELKRKELKDEPVRQAELAAYFTHCDIQPSHIRLGL
QSAMGVAYRCNNFNTAAQLARRLLDMNPSQAGIAKAKQVLQACERNPRDENRMNYDGRNP
FVVCGATFTPIYAGSRSVSCPYCAARFVPEVAGQICSVCDLAVVDADASGLVCSATQSR
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaattcgagaccaagagcaatcgcgtcaagggcttgagcttccatccccgg
cggccatggatcttggccagtctccacagcggcgtcatccagctatgggattaccggatg
ggatcgctgatagatcgcttcgacgagcacgatgggccggttcgcggcgtccacttccac
agatctcagccacttttcgtctcgggaggtgatgactacaagatcaaggtgtggaactac
aagacgaggagatgcctgttcacgctgctgggccatttggattacatccggacagtccag
ttccatcaagagtatccttggatcgtgagcgccagcgacgatcagactatcaggatctgg
aactggcagtcccggacgtgtatctccgtgctcacaggccacaatcactacgtgatgtgt
gcctcgttccacgtcaaggaggatctcgtggtttcggcgtcgctggatcagactgttcgt
gtgtgggatatcagtgctctacgcaagaagactgtttctccggccgaggatcttctgagg
ctcactcagatgaacagcgatctgtttggtggcggtgatgcggttgtcaagtatgtgctt
gaaggccatgacaggggtgtcaactgggcttccttccatccgagcttgcctctcattgtc
tctggagctgatgatcgacaagtcaagttgtggaggatgaatgatacgaaggcttgggag
gtggacaccttacgaggtcacgtaaacaacgtctcctgcgtcatgttccacgctcgccag
gacattatcgtctcgaactcggaggacaagaccattcggatctgggacatgtcgaagcga
tctggcgtgcatactttcaggagagagcacgaccgtttctggattctttcgggccaccct
gagatgaatctactcgcagcgggacatgacagcggcatgatcgtgtttaagctggaaagg
gagaggccggcgtatacagtcagtggaggggtgctgtactacgtcaaagaaagacatttg
aggacttacgattttgccaccgggaaggacaaccccctgatcgccatccggaggcctgga
tctactgggatgaaccaagcaccgagaactatgtcttacaatccagcggagaatgccgtg
ctcttgtgctccgacgttgacaacggttcttacgagttgtacgtcatatcgaaggacagc
attggcaagaacgatactcaagaagcaaagaaaggcagtggatcatcggctgttttcgtg
gccaggaaccggtttgcagttctagataaggctcacaacttgattgtagtcaggaatctc
cggaacgagctctcgaagaaagtcgacgctccggcaccaacagtagatgcaatcttctat
gcgggaacaggaactcttctctgtcgctcagatgacaaggtgatcttgttcgacatccag
caaaagtcgattttgggagagatcaacagcccgcaggtgaagtacgtggtgtggtcacag
gatatggaggctgttgctttagtgagcaagcatagtatcgtcatggcaacgaagaagcta
gctcttaagtgcagtgttcacgagacaattcgtatcaagagtgctgcatgggacgaaaca
ggagtgttcatctatacgacgttgaatcatatcaagtactgccttccaaatggagacagc
ggcaccatcatgactctggacgttcccatttacatcactcgagttgctggagacaaggtt
tactgtctcgacagggatggaaaagtgaggacgatcaccatcgacactacagagtttacg
ttcaagcttgcattgattcagaagcgttatgaccgagttttggagatgatcagaagctcc
caactttgtggacaggcgatcatctcgtacctccagcagaaaggatttccagaggtggcc
ttgcactttgtcaaggatgagaggacgaggttcaatctggctatcgagtgcggcaacatc
gaagtggcagtcgtgtcagcaaaggaaatcgacgagaaggattactggtacaggctcgga
gtggaggctttgcgacagggaaaccatgagattgtggagtacgcttaccagcggacgaag
aactttgagaggctgtcgttcctctacttgataactggtaacttggagaagctgtccaag
atgctcaagatcgcagagatgaggaacgacgtgatgggatgcttccacaacgccttgtac
ctgggcgacgtcgaagagcgagtgaagctacttgagaaatcgggacaccttcctcttgcc
tatgcagcggctaaagttcatggtctcgatgaggtggcggagcgtttggccactgagctg
ggtgataaggttccacagattccgaaactcgagacgtcgaagctgctactgccgccgagc
ccaatcctccgtgacaacaactggcctttgctcctgatcagcaaaggcttcttcgaaggc
gcctttgctgagccgggggtggtagaccaagaagaagaaaacgccccggatgcttggggc
gacgagctcgtcatacccagcggagatgctcaagctggagctgccgaggccgaagacctg
gaggaggccggaagagctggtcctggagccgagggcgaggaggaaggaggatgggaactg
gaagacttggaacttcctccggaagtggtgcagccagtcgagtccctcacatatgggctc
gagaggaactggtcggactcgtcacctccaaacgtccgaaacggcccggcactaatctac
aagctcccggcgctggaagatcgagcaaagcaggcgtacaaggcgacaactgaggggaag
tttagcgaagctctccgcctcttcctgagcatcctccacaccgttccagtgatcgtggtg
gacagccgcaaggaagttgacgacgtcaaggacctcatcggcaagagcaaggagtacgtc
cttacgctcaagatggagctcaagcgcaaggagctcaaagacgagccggtccggcaggcc
gagctcgcggcctacttcactcactgcgacatccagccttctcacatccggctgggactc
cagtcggccatgggggtcgcgtatcgctgcaacaatttcaacacggcggcgcagctggcg
aggcgattgctggacatgaatccaagccaggccggcatcgccaaggcgaagcaggtcctc
caggcgtgcgagaggaacccccgcgacgagaacaggatgaactacgacggcaggaacccg
tttgtggtgtgtggagcgacgtttacgcccatctacgcgggaagcagatcggtgtcgtgc
ccctactgcgctgctcggttcgtccccgaggtggccgggcagatttgcagcgtctgtgac
ttggcggtggtggacgctgatgcgtccgggcttgtgtgctccgcgactcaatcgcgatga
DBGET
integrated database retrieval system
