Selaginella moellendorffii: SELMODRAFT_85792
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Entry
SELMODRAFT_85792 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_85792
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_85792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
9652676
NCBI-ProteinID:
XP_002966799
JGI:
85792
UniProt:
D8R5D5
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
TGNPIDDCWRCDPHWHSHRKRLADCAIGFGKNTIGGRDGDFYTVTDPSDDPVNPRPGSLR
YGAIQDRPLWIIFARDMTIVLSQELIVNSHKTIDGRGHAVRIAYGGCLTVQYVRNVIVHG
IGIHSCRRTGPAMVRSSPGHVGWRTVSDGDGISIFGSRDVWIDHCFLADCADGLIDAIMG
STGITISNNYFRDHNKVMLLGHSDSYTLDKMMQVTIAFNHFGEGLVQRMPRCRYGYFHIV
NNHYTHWRMYAIGGSANPTINSQGNRFVAPADVNSKQVTKREFAGERSWMKWNWRSEGDS
YINGAYFRPSGAGSAAVYAKASSLPARPAALVPAMTAFAGPLNCRHHVSC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
accgggaaccccatcgacgattgctggcgctgcgatccccactggcactcccaccgcaag
cgcctggccgactgcgccatcggcttcggcaagaacaccatcggcggccgcgacggcgat
ttctacacggtcaccgatccctcggacgatcctgtgaatccgaggcccggatcgctgcgc
tacggcgccatccaggaccgcccactgtggatcatcttcgcgcgcgacatgaccatcgtc
ctctcccaagagctcatcgtcaacagccacaagacgatcgacggccgggggcacgcggta
cggatagcgtacggcgggtgcctgaccgtgcagtacgtccgcaacgtcatcgtgcacgga
atcggcatccacagctgccgccgtacggggccggccatggtaaggagctcgcccggccac
gtcggctggcggacggtgtcggacggcgacggaatatccatcttcggctcccgggacgtg
tggatcgaccactgcttcctggccgactgcgcggacggcctcatcgacgcgatcatggga
tccacggggatcacgatctcaaacaattactttcgcgaccacaacaaggtgatgttgctc
ggccacagcgatagctacaccctcgacaagatgatgcaagtcaccatcgctttcaatcac
ttcggggaggggcttgtgcagcgaatgcccaggtgccggtatggatacttccacatcgtc
aacaatcactacacgcactggagaatgtacgcgatcggcggcagcgcaaacccgacgatc
aacagccagggcaacagattcgtggcgccagccgacgtaaactccaagcaggtgaccaag
cgagagtttgcgggcgagcggagctggatgaagtggaactggcgatccgagggcgacagt
tacatcaacggcgcgtatttcaggccctcgggcgcgggaagcgccgcggtatatgccaag
gcatcgagtctccccgcgaggcctgcggcgttggtgccggccatgacggccttcgcgggg
cccctgaattgccgccaccatgtatcgtgttaa
DBGET
integrated database retrieval system
