Selaginella moellendorffii: SELMODRAFT_86463
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Entry
SELMODRAFT_86463 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
smo
Selaginella moellendorffii
Pathway
smo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SELMODRAFT_86463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_86463
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
SELMODRAFT_86463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
VWA_2
Ku_C
VWA
VWA_4
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
9635346
NCBI-ProteinID:
XP_002966971
JGI:
86463
UniProt:
D8R7P9
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG
EAYEGIVSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRIC
LITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVKFDAAILRMNEEKRESGSESTEILEN
LASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQERVPS
LKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPDMELS
LKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAISALARALKQTNMVAL
VRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPASQLPS
KQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQRFYHFLYLKSLNPDALVPQLDETL
KKVIEPDFSSEHIEKLQGLCSQFTLKTKNSTKFWKDRIEAAAKDDDAEAKPDVDTSGSGL
SFDSFATRQVEEVGSLNPVQDFQTLLARRDSDEWVGKAIQGMKKIIIDLLDSSYKGNTYD
KALTCLAALRSGCVMQEESKEFNDFFRVLADKCQGKRLSDFWDAVIQRKLTLISKGEVSD
SDVTEEAALAFLTSRTVKEEPTTAEEAEEIDEMDALLGEAV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
caggaatcgctagtttttgttctcgatgtgtctccgtcgatgcatccctatctccatcac
gtttctaaagctacggcagctgtgctggaaaggaagttattcaatcacaaaaacgatgag
gtgggacttgttctctttggcatggaagagactgataacgatcttagacgagaagttggg
gaagcatacgaaggcattgtgagcgaaccgattacgcttgtcgatggtgagctggtgacg
aagctgcgagcgcttccccggggatgctacgcaggagactatgtcgatgccatcgttgtt
gccacagatatgatcttcaaaaagtatggagatggaaagaaaggaaacaagcggatctgc
cttataaccgatgcccagtcgccgataaaagagccaatggaaggtatgagtatgatggaa
caggttgagaaaatcgcagagaaaatggaagaccatggagtgaagttcgacgcggctata
ctcagaatgaacgaggaaaagcgtgaaagcggctcggagagcacggagattctagagaat
ttagcgtctcggacgcacggagaagtcacaaccgtggaaagtcctctgtgcttgtttgga
gctctaaagcctcgcacagtaactcccacgacgctctaccgaggagatatggagatgaca
ccaggtgcacgaattaaggtttgggtttacaagaaagccgctcaagaaagagttcctagt
cttaaggtttactcagacaaagcaccccaaagtgatgcgcttgcgactcacgttgtgaaa
atggatactgattacaaaagcagtgacgacccgacagtgtccattccgaaagcacaacga
gcaaagggttactactatggtcagcagcttatccctgtgaccccagacatggaactctca
ctcaagttcactgctgacaaaggagtaaagctcctaggattcacagaagctgccaatatt
ccaaggcactactatatgaaggagccgaatctttttgttccggagcctggcaatcgtaaa
gcttctcttgcaatatccgctcttgcacgagctctgaaacaaacgaacatggtggcctta
gtccggtgtgtttggagacaaggacaacgaaatgttgtgatgggagttttgacaccaaat
ctatccttcgaagatggcatcgcagattctttctatttcaacatcgtgccatttgccgaa
gatattcgtgagtttggctttgcatcatttgatgaccgacctgcgtcccagttgccttca
aagcaacaagaagaagctactgatttactagttcagatgctcgacctttcgccctcagac
agcgtcgagtccctgcaaccggagaaaacgagcaatccagttttacagcgattctaccac
tttctctatttgaaatcactaaacccagacgcattggtacctcaattagacgaaactctg
aagaaagtcatagaaccagatttttcatcggagcatattgaaaaacttcaaggactttgt
agccaatttacattaaaaaccaaaaactcgacaaagttttggaaagacagaatcgaagcc
gctgctaaagacgatgatgcggaagcaaagccggatgtggatacctcgggcagtggtctc
tcgttcgacagttttgctacacgccaggtcgaggaagttggaagcttaaacccagtccag
gacttccaaacgctactagctcgtcgggacagtgacgaatgggtcgggaaagctatacaa
ggaatgaagaaaatcatcatcgatctcttggattcctcgtacaaagggaacacttacgac
aaagcactgacttgcttagccgctctccgaagtggttgcgtgatgcaagaggaatccaaa
gaattcaacgacttctttcgtgtgctagctgacaagtgccaagggaagcgcttgagcgac
ttctgggacgcagtgatccagaggaagttgacactgatctccaaaggagaagtttcagac
agcgatgtcactgaggaggcagcactggcattcttgacttcgagaaccgtcaaggaggag
ccaaccacggcagaagaagcggaagaaatcgacgaaatggatgctctacttggagaagct
gtgtga
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