Selaginella moellendorffii: SELMODRAFT_86998
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Entry
SELMODRAFT_86998 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_86998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_86998
04147 Exosome [BR:
smo04147
]
SELMODRAFT_86998
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_86998
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_86998
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_86998
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_86998
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_86998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_21
AAA_25
RsgA_GTPase
AAA_22
AAA_15
nSTAND1
Motif
Other DBs
NCBI-GeneID:
9634701
NCBI-ProteinID:
XP_002967209
JGI:
86998
UniProt:
D8R712
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MEQQSGSRSIDSSSYYSKSILSIQDLQQRTRSYDNLARPSHAQQQQRDISDAHSVVVARD
RDYGYGAVNEKDLAEEADSLSVYSIDATKNADQAQEDEGFSYWKLFQFANGLDWLMIAVG
TASAIAHGLSGPAVVLLFGLMNNAFALSPDAAFRGVVKVRSADLSQNVCWTQIGERQTAH
IKTRYLDSLLKQDIAFYDTEAKVGDIVTAVSSDILLIHDAVGEKIGACVSNFAVFLGGIV
ISISVYWKMGLMGLTATPLLLGSGFMFVAFYTKYVIQALTAYRSADLVAEQAISQVRTVY
SFVGETKALNSYAHLLEDAVKLSSKTGLSKGLGLGTVIAISYFSWTLQFWFGSKLVEKHE
IKGGTVNSLIFISIISGKALGDCMQVFGFIAKGKAAASRLFRVIERQPRINNNSDQGKTL
SRVRGRIELCNISFAYPARPEVPVFSNLSLNIPEGKIVALVGSSGSGKSTVISLIERFYD
PLKGEVKLDGRDIKCLQLKWLRAQIGLVSQEPTLFATSIKKNILMGKPDASHEELISAAK
VAGAHLFICDLPDAYNTEVGDKGIQLSGGQRQRIAIARAILKKPSVMLLDEATSALDSES
EVLVQNALDRIMQGRTTIVVAHRLSTIRNADCILVFDKGRIIESGTHAELLGRENGAYKS
LVMTQESAVVARKRRTRSRTPIAAPWASPLRSPWTSPSRISYESFNSQIEMPPVQENFQA
AEEQGPGATKLQTSYSVKSWFKERFRRVWGSAIIGTSGALTSGILAAVFPLVMANVLVLL
LQRRTKEAMKWTLGFIGLGIATLASNVVQYFFCHKVGARVTQDVQVKSLEGVLRNEVGWF
DFEENSSSAVTARLSANATTLRNVLSDTYSYFLQNVLGIVLALTLATVYDYRMGLISLAS
LPLQVLGSAAAYFKDGFAGSNVQKTHENAGRVAGEAVSSIRTVLSFGAQDSILSKFQEHL
DDAKSRRFKRACMVGLFIGVSHGLLYISSACCMLYGAYLIRRDEVSFGPLLISFSIVAYT
AYHCVEVIGLIPDFKKGIQATISMFETANRLSEIDPDAAKATKLKKIAGTVEFRGVSFRY
PSRPDVLILNNLSLKVPAGSTVALVGASGSGKSSVLALILRFYDPTSGSVMLDGRELKTL
HLRSLRKHIGYVQQEPVLFGVSIRENILYGRDFGEDLDYSATESEMVAAAKKANAHEFIS
GLPDGYETNVGERGVQLSGGQKQRIAIARAMLKNPAVLLLDEATSALDAESERIVQQAID
RLVGEQQRTTVIVAHRLSTVQSANTIVVMENGSVRERGRHAKLLELGGAYAKLIAMQQRR
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagtctggatcgcggtcgatcgacagtagcagctactacagcaagagcatt
ctcagcatccaagatctccagcagcgcaccagatcttacgataatctagcgcggccatcg
catgcgcagcagcagcaaagggatatctcggatgcgcactcggtcgtcgtcgcgagggat
agagattacggctatggcgccgtcaacgagaaagatctggccgaggaagccgactctctc
agcgtttacagcatcgatgccaccaagaacgcggatcaagcgcaagaagacgagggattt
tcctactggaagctgttccaattcgcgaatggattggactggctgatgatcgcagtcggc
acggcatcggccatcgctcacggcctctccggccccgcggtcgtgctgctctttggattg
atgaacaatgcgtttgctctgtcgcccgacgcggccttccgtggagtcgtcaaggtccga
tcagccgatctctctcagaatgtgtgctggacgcaaattggagagcggcagaccgcgcac
atcaagacgaggtacctggattcgctgctcaagcaggacatcgccttctacgacacggag
gccaaggtcggggacattgtgaccgctgtctcgagcgatattctcctcattcacgatgca
gtgggggagaagatcggtgcgtgtgtcagcaattttgctgtgtttctgggcggtatagtg
atctctatctctgtgtactggaagatggggctcatggggctgacagcaacaccgctgcta
cttggaagtggttttatgttcgtggctttctacaccaagtatgtgattcaagcgctcacg
gcgtatagaagtgccgacttggtggctgagcaggcaatctcgcaagtgagaactgtgtac
tctttcgttggagaaaccaaagctctcaactcgtatgcacaccttctcgaggatgctgtc
aagcttagctctaagactggacttagcaaaggtctggggcttggaacagtcattgccatc
tcctacttttcatggacgttgcagttttggttcggtagcaaactggttgagaagcatgag
atcaagggaggtactgtcaactcattgattttcatcagtataatatccgggaaagcactg
ggagactgcatgcaagtgttcggttttatagccaaaggaaaagcggccgcaagcagatta
ttcagagttatagagaggcagccaagaatcaacaacaacagcgatcaaggcaaaactttg
tcgcgtgtcagaggaagaatagagctatgcaatatatcgttcgcctatcccgcacggccc
gaagtacctgtattctcgaacttgtctctaaacattccggaggggaaaatagttgcgctt
gttggatcaagtggatcaggcaaaagcacggtaatttccttgattgagagattttacgat
cctctgaagggagaagtgaagctcgacggaagggatatcaagtgtttgcaacttaagtgg
ctcagggcacagattggacttgtaagccaggagcctactttatttgccaccagtattaag
aagaacatcttgatgggaaagccagatgcaagccatgaagaactcatatcagcagcaaag
gttgctggagctcatctgtttatatgtgatcttcccgatgcatacaacacagaggttggg
gacaagggaatccaactttctggaggacaaaggcaaagaatagccattgctcgtgcaatc
ctgaagaagccgtctgtcatgcttttggacgaagcaacgagcgcgttggattctgaatcc
gaggttctagtccaaaatgcattagacaggatcatgcaaggacggaccactattgtcgtt
gctcaccgcttgtcaactattcgaaacgccgactgcatactggtcttcgacaaaggtcgc
atcatagaaagtgggacacatgctgagctacttggtcgtgagaacggtgcttacaagtct
ctcgtaatgactcaggaaagtgctgtagtagcgagaaagagaagaactcgcagcagaaca
cctattgcagctccctgggcctccccattacgatcgccatggacttcgccgtccaggatt
tcgtacgagtctttcaactcacaaatcgagatgcctccggttcaagagaattttcaagct
gctgaggagcagggacctggagccaccaagttacagacctcttactctgtgaagtcgtgg
ttcaaggaacggttcaggagagtatggggttctgcaataatcggaaccagtggagcttta
acttctgggattctagcggctgtgtttcccttggttatggccaacgtcttagttcttctg
ctgcagaggcgcacgaaggaagccatgaagtggaccttgggatttattggcctcggaatt
gcaacactagcaagcaatgtggtccagtatttcttttgccataaagttggcgccagagtc
actcaagacgtccaagtgaaatcgctggaaggagttttgaggaacgaagttggatggttt
gatttcgaagagaacagtagctccgcggtgactgcacgtctatcagcgaacgcgaccacg
ttgaggaatgtattgagcgacacttacagctacttcttgcaaaacgttttgggaatcgtg
ttggccttgaccctggccaccgtctatgactacagaatgggactcatttccctcgcaagc
cttcctcttcaagtgctcggtagcgctgctgcctacttcaaagatggatttgccgggtcg
aacgtccagaaaacccacgagaatgctggtcgagttgcaggagaagcagtctccagcatc
agaacggtgttatccttcggcgctcaagacagcatcctgtcaaagttccaggaacatcta
gacgacgccaaaagccggagattcaagcgcgcttgcatggtgggattgttcatcggagtc
tctcacggcctcttgtacatctctagcgcctgctgcatgctctacggcgcctatctcatc
cgccgagacgaagtcagctttggacctctcctcatctccttctccatcgtggcctacacc
gcctaccactgtgtggaagtcatcgggctcattccagacttcaagaaggggatccaggcc
accatctctatgttcgagactgccaaccggctctcggagatcgatccagatgcagcaaaa
gcaaccaagctcaagaagattgccgggactgtggagttccggggcgtgagcttcaggtac
ccgtcgaggccggatgttctgatactcaacaacctgagcctcaaggtcccggctggatca
accgtggcactggttggagcaagcgggtccggcaagagctcggtgctagctctgatcctg
cgcttctacgacccgacctccggaagcgtgatgctggacggcagggagttgaagactctc
cacctgagaagcctgaggaagcacatcggctacgtccagcaggagccagtgctattcgga
gtgtcaatccgggagaacatcctctacgggagggactttggcgaggacttggactacagt
gctactgagtcggagatggtggcggcagcaaagaaggccaatgcgcatgagtttatcagc
ggcctgccggatggctatgagaccaacgtcggcgagcgtggtgtccagctttcaggcggg
cagaagcagcgcatcgccattgcgcgggcgatgctcaagaacccggcagtgctgctgctg
gacgaggccactagtgccttggacgcggagtcggagaggattgtccagcaagcgatcgat
cggctggttggggagcagcaacgcactacggtcatcgttgcacacaggctatcgacagtg
cagtctgcaaacacaattgtggtgatggagaatgggagtgtgagggagagaggcaggcat
gccaagctcctcgagctcgggggcgcttatgcaaaactcattgctatgcaacaaagaagg
tga
DBGET
integrated database retrieval system
