Selaginella moellendorffii: SELMODRAFT_874
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Entry
SELMODRAFT_874 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_874
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_874
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
9643028
NCBI-ProteinID:
XP_002974028
JGI:
874
UniProt:
D8RS09
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
TLFQQLPLSQLTLDGLRDAKYVTMTDIQRAALPHALCGRDILGAAKTGSGKTLAFLIPVI
EKLYRLRWTSMDGVGALIISPTRELAMQIFDELRKVGKFHDLSGGLLIGGRKDVSTEKQS
VNGLNILVCTPGRLLQHMHETVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER
QTFLFSATQTRSVQDLARLSLQSPEYLAVHAESAVATPARLQQTVMVVPLDQKIDTLWSF
IKSHLRAKVLVFLSSCKQVKFVYEAFKHLRPGVPLTCLHGRLRQGGRLDAFYKFVEAEYA
VMFATDIAARGLDFPTVDWVVQADCPEDVATYIHRVGRTARYKASGRSLLLLSPSETKMV
ALLEEAKIPIKVLKPNEKKIQSVSQLISGLLSKNADLKHMAQRAFTTYLRSVYLQGNKEV
FDVHKLPIPEYAASLGLPSVPRVRFLGKGQSSAGKNV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
acgttgttccagcagctgcctctctcgcagctcacattggatggtctcagggacgccaag
tatgtgactatgaccgacatccaaagggcagctcttccacacgcactgtgtgggagagac
attctcggggcagccaagacggggtcgggaaaaacgctagcgtttctcattccagtgatt
gagaagctctaccgtctacgatggacctccatggatggcgttggtgcgcttatcatatct
cccactcgcgagctcgcgatgcaaatctttgacgagcttcgcaaagttggcaaattccac
gaccttagcgggggcctgttgataggaggaagaaaggacgtgagcactgagaagcaaagt
gtcaatggcctcaacattctcgtctgcacgcccgggcgcctgcttcaacacatgcacgag
actgtgaatttcgattgctccccgctcaagctgctggtgttggatgaagctgaccgcatc
ttggatatgggatttgccgggactctcaaccagatcattgctcagattccaaaggagcgt
caaacttttttgttctcggctacacagacacggtcagtccaggatcttgcgaggcttagc
ttgcagtcccccgagtacttggccgtgcatgccgagtctgctgtagcaacacctgcgcga
ctccaacaaactgtcatggttgttcccttggatcaaaagatcgatacgctttggagtttc
atcaaatctcaccttcgagcaaaagttcttgtgtttctttccagttgcaagcaggtgaag
ttcgtatatgaggcattcaagcatctccggcccggagttcctctcacctgcttacatgga
cgcttgaggcagggtggcagattagatgccttttacaagtttgtggaagcagagtacgcg
gttatgtttgcaaccgatatcgctgcgagaggactggattttccgacagttgattgggtt
gttcaggccgactgtcccgaagacgtggcgacgtatatccatcgtgttggtagaactgcc
cgctacaaagcttcaggccgctccctacttctattgtctccgtcagaaacaaaaatggtg
gccttactcgaggaagcgaagatcccgattaaagttttgaagccgaatgaaaagaagatc
cagtccgtgtcacaactgatttcgggacttctttcaaagaatgctgatctcaagcacatg
gctcaacgtgctttcacgacatatctacgatcggtttatttacaaggcaataaagaggtc
tttgacgtccacaagcttcccatacctgaatatgcggcatcattgggcttgccatcagtc
cctcgagttcggtttcttgggaaagggcagagtagcgccgggaaaaatgtg
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