Selaginella moellendorffii: SELMODRAFT_88182
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Entry
SELMODRAFT_88182 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
smo
Selaginella moellendorffii
Pathway
smo04142
Lysosome
smo04144
Endocytosis
smo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_88182
04142 Lysosome
SELMODRAFT_88182
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
SELMODRAFT_88182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_88182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_88182
Membrane trafficking [BR:
smo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
SELMODRAFT_88182
Exosome [BR:
smo04147
]
Exosomal proteins
Proteins found in most exosomes
SELMODRAFT_88182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
ACDC
Motif
Other DBs
NCBI-GeneID:
9630839
NCBI-ProteinID:
XP_002967547
JGI:
88182
UniProt:
D8R9H5
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MTATGAPIVTKEIVSLTGLGIGAQFVGFSFVTMESEKYICVRETSPQNSLMIVDLSVPKQ
PLRRPIAADSALMNPLGKVLALRGNHSSILAFSLTFFSFFIFLLIAQEQLQVFNLDTKAK
LKAYQMNEQVYRLWKWITPKIIGLVTQDAVYHWSIEGPPEPVKMFERAANLNGHQIINYR
CDPTEKWLVLIGIAPGPPERPQLVKGNMQIYSVDQKRSQSLEAHAAAFGSFKLAANDAAS
VIISFASKSYSGAQVVSKLHVIELGAQTGKVGFGKKQAELFFPPEFADDFPIAIQMSQKY
GVIYVLSKMGLLFVYDLETAVAVYRNRISVDPFFISADAPSNGGFYAVNKRGQVLMGTIN
ETTIISFISDQLKNMDLAVSLAKRANLAGAEKLVVQRFHELVSQTKYREAADLAAESPQG
VLRTPETIAKLQLITVPPGQTSPLLQYFGTLLTKGRLNAFESLELSRLVVSQSKKHLLEN
WLAEDKLECTEDLGNLIRGVDAEMALKVYIKARATAKVIAGFAERREFDKILIYSKQVNY
TPDYLFLLQSVLAIDPQAAVNFALILSKMDGGCPVDYNIIIELFLQRNMIRETTAFLLDV
LKENLPEHGLLQTKVLEINLLTFPNVAEAIMANGVFSHYDRSRIAQLCEKSGLFMRALQA
HLHYTELTDIKRVIINTHTMDVQALVEFFGTLSKDWALDCMKELLLIDMRQNLQIVVQVA
KEYAEQLGVEHCIDLFEQFRCYEGIFFFLGAQLAKSEDANVHFKYIEAAAKIGQLKEVER
ATRESKFYDAERARNFLMEIQLPDARPLINVCDRFGFIPELTHYLYSKNMLRYIEGYVQK
VNPGNAPLVVGQLLEEDCQEDFIKNLVFSIRSLVPVEPLVAECQKRNRLRLLTPFLENLV
SEGSKDVAVHNALAKIAVDTSNNPEHFLTTNPYYDSQVVGKYCENRDPTLAVIAYHRGQC
DDDLIHVTNRNSLFKVQARYVVERMDPELWAKLLNPDNFYRRQFIDQVVSTALPDTRSPD
QVSAAVKAFMLADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKAEKSRVMDYVNR
LDNFDGPAVGEIAVGAELYEEAFTVFKKFSLHTQAVNVLLENLQSIGRGVDFANRVEEAD
VWRQVAKAQLKIGAVAEAIDSFTRAKDTTHFSEVIKAAEEVKAYDDLVKYLLMVRKSIKE
PKVDSELIYAYAMSDQLSDIEDFLLQSHVANLPSVGERLYEDGAYQAARIIFTQTSNWGR
LATTLIKLKLFQDAVDASRKADNSRVWKEVCFACVDAEEFRLAQICGLHVIVQVDDLEEV
SDYYQKHERWKELIALMESGLGLERAHMGIFTELGVLYAKYLPDKLMEHLKLFSARVNIP
KLIRACSEQQHWKELTFLYIQYDEFDNAAATMIAHSPEAWDHTQFKDIAVKMAKIELYYR
AITFYLEEHPDLLNDLLLVLSSRVDHTQVVNLLRKAGHLPMIKPYLVSVQSHNLSAVNEA
LNALYVEEEEFDKLRESIEMYDTFDQISLAQQIEKHELLEFRRIAAFIYNKAGRWRQSVE
LSKKDELYKDAMETCSESGDGMLTEELLTFFVEQGRRDCFAACLYICYDLVRADVALELA
WMHKMLDYVVPYMIQFIREYTNKVDELMKDKYDSLQELRSKSSEDKDMLSKQNLYAQLLP
LALPGPTAPGMYEIPYGMSPPPPPPSTSFAGMPPMSF
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaacgggagcgccaatcgtgactaaggagatcgtatcgctcacggggcttggg
atcggggctcagtttgtcggattttctttcgtcaccatggaatccgagaaatatatctgt
gtcagggagacttcgccacagaacagtctcatgattgtggatttgagcgtaccaaagcaa
ccgttgcgtcggccgatcgccgcggattcggctttgatgaatcctttgggaaaagttctc
gctcttagaggtaaccacagctcaattctagcgttttctctaacatttttctcattcttt
atttttttgttgatagcacaagagcagctacaagtttttaaccttgacaccaaggccaag
ctaaaagcttatcaaatgaacgaacaggtctatcgtctttggaaatggatcacaccgaaa
atcattggactggtgacacaggatgcggtttatcactggtctattgaagggccgcctgag
ccggtgaagatgtttgagagagcggccaatttgaatggccaccagatcatcaattatcgc
tgtgaccccactgagaaatggcttgttttgatcgggattgctccaggccctccggagcgt
cctcaactagtgaaaggaaatatgcagatttattccgtagaccaaaagcgaagtcagtca
cttgaagctcatgctgcggcatttggatctttcaagcttgccgcaaatgacgctgcatct
gttattatatcttttgcatcaaagagctattccggggcccaggttgtgtcaaagctgcat
gtaatcgaacttggcgcacagacaggtaaggttgggtttgggaaaaaacaggccgaactc
ttttttcctcccgaattcgctgacgactttcccattgcaattcagatgtctcaaaagtat
ggtgttatctatgtcctctcgaaaatgggacttctttttgtctatgatttggagactgct
gttgccgtgtataggaatcgtatcagcgtagatccctttttcatttctgctgacgctcct
tcaaatggaggtttttatgctgtgaacaaacgcggccaagttctcatgggcacaatcaat
gagacgacaattatttctttcatcagcgatcagctaaaaaatatggaccttgcagtaagc
cttgcaaagcgagcgaacctcgctggagctgaaaaactcgtcgtgcaaagatttcacgag
ctagtttcgcaaaccaagtacagagaagcagcagacctggccgccgagtctcctcaaggt
gttcttcgaactcctgaaactattgcaaaacttcagctgatcactgttccacctgggcaa
acttctcccttgcttcaatattttggcaccttgttaacgaaaggtcgcttaaatgcattc
gaatctttggagttgtctcgactggttgtaagtcagagcaagaaacatctgctggaaaac
tggttagcggaggacaagctggagtgtacagaagacctggggaacctcatcaggggggtt
gatgccgaaatggccctgaaagtttacattaaggcccgagcaacggcaaaagttattgct
ggatttgctgagagaagggaatttgataagatattaatctactccaagcaggttaactac
acgccagactatcttttcttgttgcaatcagtattagccatcgatccgcaggctgcagta
aattttgcgttgattttatctaaaatggacggtggctgtccagttgattacaacatcatc
attgaattatttctccagcgcaacatgatccgggaaactaccgcttttcttttagatgtg
ttgaaggaaaatcttccggaacacgggctgcttcaaacgaaggttctcgagatcaacctg
ttgacatttcctaatgtggcagaggccatcatggcaaatggtgttttcagccactatgac
cgatctcgcattgctcagctttgcgaaaagtccgggcttttcatgagagcacttcaggca
catctacattacacagagttgacggacataaaaagagtcataataaacacccatacgatg
gatgtgcaggcattagtcgagttctttggcacactttcaaaagactgggcgttggattgt
atgaaagaattgctcctgattgatatgcgacagaatttgcagatcgtcgtgcaggtggcc
aaagaatatgcagagcaacttggagtcgaacattgtattgacttgtttgagcagtttaga
tgctatgaaggcatatttttcttcctgggagcgcaacttgcaaaaagtgaggacgccaac
gttcactttaagtacatcgaagcagctgctaaaattggtcagctgaaagaagtggaacgt
gcaacaagggaatcgaagttctacgatgcagagcgagctaggaattttctcatggaaata
cagcttccagatgcccgtccattgataaacgtctgcgaccgctttggatttatccccgaa
ctaacacattatctatactcaaagaacatgctccgctacattgaaggctacgttcaaaag
gtaaacccaggaaatgcaccactagttgttggccagcttcttgaggaagattgtcaagaa
gattttatcaagaatttggtgttttctatccggtctcttgttcccgtagagccacttgtg
gccgagtgtcagaaacggaatcgactgaggctgctcactccatttttggagaacctggtc
tctgagggcagcaaagacgtagctgtgcataatgcccttgctaagattgctgtggataca
agcaacaaccctgaacattttctcaccaccaatccttactatgattctcaagtcgtggga
aagtactgtgagaatcgggatcctacgctggctgttattgcataccatcggggccagtgt
gatgacgatttgatacatgtaacaaacagaaactcgctattcaaagttcaagcaagatat
gttgtggagcgcatggatcccgaactctgggcaaagcttctcaatccagacaacttttat
agacggcagtttattgatcaagtcgtttctaccgctctacctgatactcgaagccccgat
caagtctcagctgctgtgaaagcttttatgctagcggaccttccgcacgagctgatagag
cttcttgagaaaattgtgctccaaaactcggcattcagcgacaatccaaacctgcagaac
ctccttatactcacggccatcaaagcagagaagtctcgagttatggactacgtaaatcgt
ttggacaacttcgacggtcctgcagtgggggagattgctgtcggtgcggaactctatgaa
gaagcattcacggttttcaaaaagttttccctgcacacccaagccgtcaacgttcttctc
gagaacttgcaaagcatcgggcgaggtgttgactttgcaaacagggtggaagaagcagat
gtttggaggcaagtcgccaaagctcaactcaaaattggagcggttgctgaggctatcgat
tcgttcactcgtgcaaaggacacgacgcacttcagtgaagttatcaaggcagcagaggag
gtcaaagcttatgatgatcttgtgaagtacctcttgatggtccggaagagcatcaaagag
ccaaaagtcgactcggagctgatatacgcctatgcaatgtcagatcaactgagcgacatc
gaagattttctcctccagtcgcacgtcgccaacttaccgagcgttggcgaaaggctctac
gaggatggtgcttatcaggctgccagaatcatcttcactcagacttccaactggggccgg
ctggcgacgacgctcataaaactgaagctgttccaggacgctgtggatgcatccaggaaa
gctgacaactccagagtatggaaagaggtctgttttgcttgtgttgatgcagaggagttt
aggctcgcgcagatttgtggactgcacgttattgtccaggtagacgaccttgaggaagtc
agtgactactatcagaaacacgaaaggtggaaagagcttattgcgttgatggagagcggc
ttgggactagaacgcgcacacatgggaatttttactgagctaggagtgctgtatgcgaag
tatcttcccgacaagcttatggagcacttgaagctattcagcgctcgcgtcaacatcccc
aagcttattcgagcgtgcagcgagcaacagcactggaaggagctaaccttcctttacata
cagtacgacgagtttgacaatgctgcagcgactatgatagctcattctccagaagcttgg
gatcacacgcagtttaaagatatcgctgtgaagatggcgaagatcgaattatactaccgg
gctatcacgttttatctcgaagaacatccagatcttctcaacgatctgttgcttgtcctg
tcttctcgtgtcgatcatacacaagtggtgaatcttctcagaaaggctggtcacttgcct
atgataaaaccatacctggtgtcggttcaaagccacaaccttagcgcagtgaacgaagca
ctcaatgcgttgtatgtcgaggaagaagagtttgacaaactgcgggagtctatcgaaatg
tatgacacgtttgatcaaatctcgctagctcaacaaattgaaaaacatgagctactggaa
tttcgtcgcatcgcagctttcatctacaacaaggctggaaggtggcggcagtctgtagag
ctttcaaaaaaggacgagctgtacaaggatgccatggaaacttgctcggagtctggggat
ggaatgctaaccgaagagctactcacattctttgtcgagcaagggagacgggattgtttt
gccgcttgcctatacatttgctacgatcttgtaagagccgatgtggccttggagctggca
tggatgcacaaaatgctggattatgtcgtcccctatatgatccagttcataagggagtac
acaaacaaggtagacgagctcatgaaggacaagtatgactctctccaagagctgcgctcc
aagtctagcgaagacaaagatatgctctccaaacagaacttgtacgcgcagcttcttcca
ctggcactgccgggaccgaccgctcccggaatgtatgaaatcccgtatggaatgtctccg
ccgccaccgccgccttccacttctttcgctggtatgccaccgatgagcttctaa
DBGET
integrated database retrieval system
