Selaginella moellendorffii: SELMODRAFT_88799
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Entry
SELMODRAFT_88799 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_88799
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_88799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
9632814
NCBI-ProteinID:
XP_002967588
JGI:
88799
UniProt:
D8R9P7
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
NAIDDCRKSAVDWNSDRMHMAGCGIGFGSGAFGGANGNYYTVTDPSDDPLNPQPGTLRYA
VIQEEPVWIVFQSDMTITLRNELVVNSHKTLDGRGASVHIAHGACITIFRASRVIIHGLN
IHHCVTTEGGWVATKPGHLSHRGRADGDGIRVFESHHVWIDHNSFWECHDGLVDVLHGSN
FITISNNHFHDHDKVMLLGHADESELDHDMKITVVYNRFGPRCVQRMPRCRFGYFHVADN
DYHAWEMYAIGGSAHPTIISQGNRFLASDNRDAKEITKRVGHAGDWISIDDVFLNGAFFV
ESGRGDLISRYTPEQQFEVKSGSQVTAMTAEVGVLKCQSSLATC
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
aacgctatagacgattgccgaaaaagtgccgtcgactggaacagcgatcgaatgcacatg
gccggctgtggaatcgggtttggcagcggtgccttcggcggagctaacgggaactactac
acggtgacagacccgagcgacgatccactgaatccacagccgggaacgctccgctacgca
gtgatccaggaagagccggtgtggattgtcttccagagcgacatgaccatcactctccgg
aacgagctcgtagtcaacagccacaaaactttagatggacgaggagcaagcgttcacatc
gcccacggcgcatgcatcacgatcttccgggctagccgcgtgatcatccacggcctaaac
atccatcactgcgtcacgaccgagggaggatgggtggcgaccaagccgggccacttaagt
caccggggccgagccgacggcgatgggatccgggtctttgagtcgcaccacgtctggatc
gaccacaacagcttctgggagtgtcacgacggcctcgtcgacgttcttcacggctcaaac
ttcatcaccatctccaacaatcacttccacgaccacgacaaggtgatgcttctgggccat
gctgacgagtcggagctcgaccatgatatgaagatcacggtggtttacaacaggtttgga
cccagatgcgtgcagcgaatgcccagatgccggtttggatacttccatgtagcagacaat
gactaccacgcctgggagatgtatgcgatcggtggtagcgctcatcccacgattatcagt
caaggaaaccgcttccttgcctcggacaaccgagacgcaaaggaaatcaccaagcgcgtc
ggccacgccggggattggatctccatcgacgacgtgttcctgaatggagcgttcttcgtg
gagtcggggaggggagacttgatctccagatacacccccgagcaacaattcgaagtgaaa
tctggaagccaagttacggcgatgaccgccgaggtaggagttctaaagtgccaatccagt
ctcgcaacttgctaa
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