Selaginella moellendorffii: SELMODRAFT_89085
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Entry
SELMODRAFT_89085 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Module
smo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_89085
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
SELMODRAFT_89085
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
9631315
NCBI-ProteinID:
XP_002968171
JGI:
89085
UniProt:
D8RB42
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MISSGEPNVFNVRQFNARGDGIQNDTQAFLDAWNAACLVEDSVFLIPQSFTFLIWPASFK
GPCKSNMTMQIDGTIVAPGSPDQYEPGQRNSWISIVKLTSFSITGIGTIDGRGQTWWNIS
CKHNPSPGCNDEDAPTALWVFGSTGLNMSGIRIQNSQQMNVAFVSCHDVIVAKIRIENPQ
NSPNTDGIHIESSTNVTVEHAAIGTGSDDCVSIGSGSSNVVIRDCECGPGHGISIGSLGK
GESAAYVSSVLVHRVQITGTMNGLRIKTWQGGRGSASNIRFENVSMSGVANPIIIDQNYC
DALRPCSPQGSAVQVKSVEYLHIRGTSATAIATSFDCSASLPCLDLLLHDINLTQSSGAQ
ASASCSNAFGVSSGSVVPASCLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttccggagaaccaaacgtattcaatgtcaggcaattcaacgcccggggagat
ggaattcaaaacgatactcaggccttcctagatgcttggaacgctgcttgcttggtggaa
gactccgtttttctcatcccacagtcattcaccttcttgatctggccggcatctttcaaa
ggaccatgcaaatccaacatgacaatgcagatcgatggaaccattgtagctcccgggagc
ccggatcaatacgagcctgggcagaggaactcgtggatctccatcgtcaagctcacgagt
tttagcatcactggaatcggaacaattgatgggcggggtcaaacgtggtggaacatctct
tgcaaacacaacccttctcctggatgcaatgacgaagatgccccaacagcattgtgggtg
tttggatcgacggggctaaacatgagcggcattcgcatccaaaacagccagcagatgaac
gtcgcgttcgtgtcatgccacgacgtgatcgtcgcgaaaataaggatagagaatccacaa
aatagcccaaacaccgacggcattcacatcgaatcgtccacgaatgtgacagtagaacac
gcggccattggcacaggtagcgacgattgtgtgtcgattggatcggggtcgtccaatgtc
gtgatcagggattgcgagtgtggccctggccatggcatcagcattgggagccttggcaag
ggagaaagcgcagcttatgtttccagcgttcttgtgcatcgcgtgcaaataactggaacc
atgaatgggctgaggatcaagacatggcagggaggccgcggcagcgccagcaacatccga
ttcgagaatgtatcgatgagcggcgttgcgaatcccatcatcatcgatcagaattactgc
gacgcgctgcgcccctgctcgccacagggatcggccgtccaggtgaagagcgtcgagtat
cttcacatccggggaacctccgcgaccgccatcgccacgagcttcgattgcagtgcctcg
cttccctgccttgatctcctcctccacgacatcaatctcacgcagagctcgggagctcaa
gcctcggcaagctgctccaatgcgttcggtgtttcatccggcagcgtcgtcccagcgagc
tgcctcgcgtga
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