Selaginella moellendorffii: SELMODRAFT_89228
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Entry
SELMODRAFT_89228 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_89228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_89228
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_89228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_NOL10_N
DSE1_N
PAC11
WD40_RFWD3
Beta-prop_SCAP
NBCH_WD40
WD_LRWD1
Beta-prop_ACSF4
Beta-prop_SPT8
ASA1
Beta-prop_WDR11_2nd
PigL_N
Beta-prop_HPS5
Utp13
TAP1-like_HTH
Motif
Other DBs
NCBI-GeneID:
9631459
NCBI-ProteinID:
XP_002968570
JGI:
89228
UniProt:
D8RBP3
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MEAASSYVPVGKKQLPKSRNPLTADSKFWRRFKRRIVDEQKFAVTCVDFCPVFPHDFVVT
ASTRVSFCRISCAFAMRMPLCRLCFRPDGQLIMAGGETGLIQVIFDANSRITLRQLKGHS
RAVRWVRYSESDKLHVLSGSDDNSVRWWDVASEEAVVKFQEHTDYVRCGSYNPASPGIWV
TGSYDHTVRMWDTRTAKSVSLLQHDKPLEDVLFFPSGSLLATAGGNMVKIWDVVAGKVLT
VLGNHQKTVKKLKLTTPSESESRLLTASLDGLLKVFDIEDFKVVHAAKYPGPILAMDVSP
SCTSLAVGTASGLLSVRQRKSVISEERATQALEVSGQEQKEVLRPSNFRYFLRGATEKAS
DDDYVLGSTKRALRQEHDWLLLKFRYKDALLAALNTKDPTVVVAVIEELVARKGLVQAFS
NLEVGELEILLAFLTKHVASPKYSRLLVPAAHSVFDTCATSFAASQSLKQQVTKLKYAVE
EEVRLQESLQSFQGMLQTLVQAAVH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcatcgagctacgttcccgtcgggaagaagcagctgccgaaatcgcgcaat
cccctcactgccgattcgaagttctggaggcgattcaagcgcaggatcgtcgacgagcag
aaattcgcggttacctgcgtggatttctgtccggtttttcctcacgattttgtggtcaca
gcgtccaccagggtaagcttctgccgcatttcttgtgcatttgcgatgagaatgccgttg
tgtaggttgtgctttcgtcccgatggacagttgatcatggctggtggcgaaaccgggttg
attcaggtgatcttcgatgccaatagtcggataacgctccggcaattgaaaggtcactcc
agagctgtgcgttgggttcgctactcggaatcagacaagcttcacgtgttatctggaagt
gatgataattcggtccggtggtgggatgttgctagtgaggaagcagtggtgaaattccag
gagcacacggattacgttcgttgcggttcatacaacccagcgagtcctgggatatgggtc
actgggtcctacgaccacactgtgcgaatgtgggacactcggactgcaaaatccgtatcg
ctgctgcagcatgataagcccttggaagatgttctcttttttccttctggaagtcttctc
gcaactgccggtggaaacatggtgaagatttgggacgtggtggctggaaaggttttgacg
gtcctcgggaatcatcagaaaactgtgaagaagctgaagctaacgacgcctagcgagtcg
gaatccagacttctcacggcatcgttggatgggctgctgaaggtttttgatatcgaagat
ttcaaggtggttcatgctgcaaaatatccaggcccgatattggcaatggatgtttcccca
tcgtgtacctcgctggccgttggaacagcatcaggtttgctttccgtgcgtcaaaggaag
agcgtaatcagcgaagagagagccactcaggctcttgaagtcagcggacaagaacagaag
gaagtgttgcggcctagcaacttcagatattttctacgtggggctaccgaaaaagcatct
gatgacgattatgttcttggtagcacaaaaagagctttgcgccaagaacacgactggcta
ttactcaaatttcgatacaaggacgctctgctcgcggctttgaatacaaaggatccaacg
gtggtggttgctgtaattgaagaactagtagctcgcaagggattagtgcaagcattttcg
aatttggaagtaggagaactggaaattcttttggcgttcctgacaaagcatgttgcgtcg
ccaaagtattcacggcttttagttcccgctgcccatagcgtattcgatacatgcgccaca
agctttgcagcttctcaatcgctgaaacaacaggttacgaagctgaaatacgcggtggag
gaagaagtgaggttgcaggagtcactgcaatcctttcaaggaatgctacagacgcttgtt
caagcagcagttcactga
DBGET
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