Selaginella moellendorffii: SELMODRAFT_89456
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Entry
SELMODRAFT_89456 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_89456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_89456
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SELMODRAFT_89456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_14
TIP49
RNA_helicase
NPHP3_N
AAA_2
AAA_17
AAA_33
Mg_chelatase
AAA_28
nSTAND3
Rad17
IstB_IS21
NB-ARC
ATPase_2
AAA_18
Parvo_NS1
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
AAA_23
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
9650292
NCBI-ProteinID:
XP_002968501
JGI:
89456
UniProt:
D8RB83
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MPQNVSFKDFGGLGNAMDVIVEFIFPVVNPDAVDAVGMEHMKALLLHGPPGCGKSLLAEA
IANEASVPFFKVSAPEVVSGTSGESEAKLRTLFSEAFRVAPAIIFIDEVDAICSKRESAQ
REMERRIVTQLMVCMDEIDYAPRGSESEGGDSNKLRRLLVIAATNRPEALDQALRRRFDR
EICLKVPDEKARLQILTVLASKLRLDGEFDFKAIARRTPGFVGADLKVLTKEAGVAAIRR
IAAKRKAAPGENEAENVWWRRAWTPEELQELRVTMDDFEVAIKKVVPSTKREGFTEIPNV
SWEDVGALETVREELEFLICSRVKHPEDYETLNFSDSGFLLYGPPGCGKTLVAKAVANAA
GANFIYIKAGELFNKYVGESERAVRQLFSRARDCSPCLIFFDEIDALAPGRGSEANAATD
RVVNQLLVEMDGLEQRKCVFVIGATNRPNMIDTALLRPGRLGKRIYIPLPDAQGRESILR
ALLRCLPLAADVDMAAIAQHELCEGFTGADLHGLVSCRSSFSSFVFSANFFLTLPPCFLL
SLAGPGGMRRRSAREDTTVACEQRASSAKRCYTHPKALRGGSQSSGAFRIGRGTHQSHDF
FPPPRHNTPVI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaatgtgagcttcaaagattttggaggccttggcaatgccatggacgtgatc
gtggagttcatcttcccggtggtaaatcccgacgcggttgatgcggtggggatggaacat
atgaaagctttgcttcttcatggacctcctggctgtggaaaatctctgctggccgaggcc
attgcgaacgaagcgagcgttcccttcttcaaggtgtcagctccagaagttgtgtctgga
acatcaggtgaatcggaagcaaagctcagaacactgttttccgaggcttttagagtcgcc
ccagccatcatattcatcgacgaggtcgacgctatttgctccaagagagagtctgctcaa
agagagatggagcggcggattgtgacgcagttgatggtctgcatggacgagattgattac
gctccacgaggctccgaaagtgaaggtggtgacagtaacaagctgcggcgcttgctcgtg
atagcagctacaaaccggcctgaagctctggatcaggctctcagacgacgtttcgatcgc
gagatctgtttgaaggtgccggatgagaaagctaggctgcaaatattgacagtcctcgcc
agcaaacttcgccttgatggagagttcgacttcaaggccattgcaaggcggacgccgggt
tttgtcggtgcggatctgaaagttcttacaaaagaagctggagttgcggctatcaggagg
attgctgcaaagaggaaggcagcaccaggggaaaacgaggctgaaaatgtgtggtggaga
cgtgcttggactcccgaagagctccaagaactgcgggttacaatggacgacttcgaggtt
gctatcaagaaggtagtgccatccacaaaacgagaggggttcacggagattccaaatgtg
agctgggaggatgtgggagctttggaaactgtgcgtgaagagctcgagtttttaatctgc
agccgtgtgaagcatcctgaggactacgagactttaaatttctcggacagtggatttctt
ttgtatgggccgcctggatgcggcaagactttggttgcaaaggccgtggccaacgctgct
ggagccaacttcatctatatcaaggcgggcgagctttttaacaaatacgttggtgagagt
gagcgagcggttcggcagctgttttctcgcgccagagattgctcgccttgcctcatattt
tttgacgagatagatgcattggcaccaggccgtggaagcgaagcaaatgcggcgactgac
agggtagtgaatcagcttttagtcgagatggatggtctggagcagcgaaagtgtgttttc
gtgattggagcgacaaataggccaaacatgatcgatactgcgttgctcaggccggggcgt
ctcggcaaacgcatctacatccctctcccggatgctcaaggacgagaatccattctcaga
gctttgttgcgatgcttgcctctagcggcggacgtagacatggccgctatcgcgcagcac
gagctttgcgaaggcttcacaggagccgacctccatggccttgtcagttgtcgctcgtcg
ttttcctcgtttgttttttcggcaaactttttcctgactcttcctccttgttttcttctt
tccctcgcaggtccaggaggcatgcggcgtcgctctgcgcgagaggataccactgtggcg
tgcgagcaacgggcaagctccgcaaagcggtgttatactcacccaaaagcacttcgcgga
gggtctcaatcgagtggagccttccgtatcggccggggtacgcatcaaagtcacgatttt
ttccctcctccgcgtcataacacacctgtgatttga
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