Selaginella moellendorffii: SELMODRAFT_90148
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Entry
SELMODRAFT_90148 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
smo
Selaginella moellendorffii
Pathway
smo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SELMODRAFT_90148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_90148
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
SELMODRAFT_90148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40
Beta-prop_HPS5
Beta-prop_EML_2
WD40_Prp19
PEP5_VPS11_N
EIF3I
PROPPIN
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
9658914
NCBI-ProteinID:
XP_002969149
JGI:
90148
UniProt:
D8RD79
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MEDEEEELARADADDECDDDDDAADDSSSAQEAIDDEDEEPRLKYKRLGGSVPSLLSSDT
ASCISVAERMIALGTHGGRVHLLDYQGNQVKEFAAHTATVNELSFDSAGEFVGSCSDDGS
VVVSSLYTDSHEKFHYHRPMKAVALDPDYCKTNRFAGGGLAGHLILNSKGWFGPKDQVLH
SGEGPIHAVKWRTSLIAWANDEGVKLFDTASQQRLTFIEKPKNSPDAEYLRPHLVWQDDV
HLLVGWGNCIKIAALRVRGADLPGGLNSETFSFGKRFNLLPGTKYVEIVSVLQTEYFICG
LAPYGGALVVLAYIEREGSKTESATGYSPKQTGHAQRPEVCILNWKNEELATDALSMHGY
EHYKAKDYELAHAPFSGSSTAGGQWAAGYEPLYYIVSPKDVVVARQRDADDHVQWLLKHG
WHEKALEAVEAGNARVELLDEVGAQYLDHLILGREYALAASLCPKILRGSVSAWESRRVF
HFGQLRQLHVLAPYIPVVNPQLRDTVYEVVLDRLLVNPAHHEQFLELVRSWPQHIYSVPT
IISAAEIQCSTGGKTPFLLEALAILYLSQGQLENVLKLYLELQKPAAFDIIEEHHLYDAL
HGNIALLMKLDSKRAIDLLVQQRDRISASEVVSSLENLPQKESRRRLLHDYLHTLFERDT
NAGRKYHDLQVELYAEFEPRLLLPFLRSSQYYSLNKAYDVCTRLNLVREKVYLLGQMGNA
KEALALIINELKSMQAAVEFVTSRNDDDLWNELINQSLRNPDMIGALLDHTVGNIDPMQV
INRIPKDMPVPRLRDRLVKVITDYKTETSLRGGCNNILKVCVSANR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggaggaggagctcgcgcgcgccgatgccgacgacgaatgcgacgacgat
gacgacgccgctgacgattcctcctcggcgcaggaggcgatcgatgacgaggatgaagag
ccgcgcctcaagtacaagcgcctgggaggtagtgttccctctcttctctccagcgacacg
gcctcgtgcatcagcgtcgccgagcggatgatcgcgctgggaacgcacggcggcagggtg
catttgctggattaccagggaaaccaggtgaaggaattcgctgctcatactgccactgtg
aacgagctgagcttcgatagcgctggagagttcgtggggagctgcagtgacgatggatcc
gtggtggtgagcagcctgtataccgacagtcacgagaagttccactaccaccggccaatg
aaggccgtcgcgctggatccagactactgcaaaacaaatcgttttgctggcgggggactg
gcagggcatctcattctcaacagcaaaggctggtttggtcccaaagatcaggtgttgcac
tcgggagagggtcccatccatgctgtcaaatggagaacgagccttatcgcgtgggcgaat
gacgagggtgtcaaactgttcgatacagcctcacagcagcgccttacttttattgagaag
ccgaagaacagtccagacgccgagtacttgcgtccccatctagtttggcaggatgatgtg
cacctgttagtcggctggggaaattgcatcaagattgctgccctcagagtgaggggagct
gaccttcctggaggcctcaactccgaaacattctcttttgggaaaaggttcaaccttctg
ccggggacgaagtatgtcgagattgtatcagttttgcaaactgagtactttatttgcggc
ctggctccgtatggaggcgctctcgtggtccttgcttacatcgagagggagggcagcaaa
acggaatcggcaacgggctactctccgaaacagacaggacatgcccaacggcctgaagta
tgcatcttgaactggaaaaacgaagaactggcaacagatgcgctctctatgcatggttat
gaacactacaaggctaaggattacgagcttgctcacgctccattctctggaagtagcacc
gctggtggccagtgggccgctgggtacgagcctttgtactacattgtgtctccaaaggac
gtggttgttgctcgacaaagggatgcggacgaccatgttcaatggcttctcaagcatggg
tggcacgagaaagcactggaagctgtagaagctggaaatgctcgtgtcgagcttctggac
gaggttggtgcgcaatacttagatcacttgatcctggggagggagtacgcgctggcagct
tctttatgtccaaagatcttgcgtggtagtgtttcggcttgggaaagcaggcgggtattt
catttcggccaattgagacagttgcacgttctggccccatacataccagttgtcaatccg
cagcttcgcgatactgtatatgaggttgtccttgatcggttgcttgtaaatccggcgcac
catgagcagttcttggagctagttcgaagctggccccaacacatttattctgtacccacc
attatatctgccgctgagatacaatgcagtaccggcggaaaaactcctttcttactcgag
gcgcttgcgattctttacctttctcagggacagcttgaaaacgtgctgaagctatatctc
gagctgcaaaagcccgcagcgttcgacattatcgaggagcaccatctttatgatgctctt
cacggcaatattgcccttctaatgaagctggattcgaaaagagccattgacttactcgtt
caacaaagggaccgaattagtgcgagcgaggtggtttcctctttagaaaacctgcctcag
aaagagagccgccggcgtctgttacatgactatttgcatactctgttcgaacgagacaca
aatgctggaagaaagtaccatgatttacaggtggaattgtatgctgaatttgaaccacgg
ctattgctgcctttcttgcgtagcagtcagtactacagtcttaataaggcgtacgacgtt
tgcacaaggttaaatcttgtaagggaaaaagtttatttactggggcaaatgggaaatgcg
aaagaagctttagctctgattatcaatgaacttaagagcatgcaagctgctgtggagttt
gtgacatctcgcaacgatgatgatttatggaacgagcttatcaaccagagcttgcgcaat
ccagatatgattggcgcgcttttggatcataccgtgggaaatattgatcccatgcaagtc
ataaacagaattcccaaagacatgccagtgccacgtttgagagaccggctggtaaaggtg
atcacagattacaagacggagacatcgctcaggggcggttgcaataacattctcaaggtg
tgtgtatccgctaacagatag
DBGET
integrated database retrieval system