KEGG   Selaginella moellendorffii: SELMODRAFT_90148
Entry
SELMODRAFT_90148  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
smo  Selaginella moellendorffii
Pathway
smo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:smo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    SELMODRAFT_90148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_90148
Membrane trafficking [BR:smo04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    SELMODRAFT_90148
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin WD40_CDC20-Fz WD40_WDHD1_1st WDR55 WD40 Beta-prop_HPS5 Beta-prop_EML_2 WD40_Prp19 PEP5_VPS11_N EIF3I PROPPIN ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 9658914
NCBI-ProteinID: XP_002969149
JGI: 90148
UniProt: D8RD79
LinkDB
Position
Unknown
AA seq 826 aa
MEDEEEELARADADDECDDDDDAADDSSSAQEAIDDEDEEPRLKYKRLGGSVPSLLSSDT
ASCISVAERMIALGTHGGRVHLLDYQGNQVKEFAAHTATVNELSFDSAGEFVGSCSDDGS
VVVSSLYTDSHEKFHYHRPMKAVALDPDYCKTNRFAGGGLAGHLILNSKGWFGPKDQVLH
SGEGPIHAVKWRTSLIAWANDEGVKLFDTASQQRLTFIEKPKNSPDAEYLRPHLVWQDDV
HLLVGWGNCIKIAALRVRGADLPGGLNSETFSFGKRFNLLPGTKYVEIVSVLQTEYFICG
LAPYGGALVVLAYIEREGSKTESATGYSPKQTGHAQRPEVCILNWKNEELATDALSMHGY
EHYKAKDYELAHAPFSGSSTAGGQWAAGYEPLYYIVSPKDVVVARQRDADDHVQWLLKHG
WHEKALEAVEAGNARVELLDEVGAQYLDHLILGREYALAASLCPKILRGSVSAWESRRVF
HFGQLRQLHVLAPYIPVVNPQLRDTVYEVVLDRLLVNPAHHEQFLELVRSWPQHIYSVPT
IISAAEIQCSTGGKTPFLLEALAILYLSQGQLENVLKLYLELQKPAAFDIIEEHHLYDAL
HGNIALLMKLDSKRAIDLLVQQRDRISASEVVSSLENLPQKESRRRLLHDYLHTLFERDT
NAGRKYHDLQVELYAEFEPRLLLPFLRSSQYYSLNKAYDVCTRLNLVREKVYLLGQMGNA
KEALALIINELKSMQAAVEFVTSRNDDDLWNELINQSLRNPDMIGALLDHTVGNIDPMQV
INRIPKDMPVPRLRDRLVKVITDYKTETSLRGGCNNILKVCVSANR
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggaggacgaggaggaggagctcgcgcgcgccgatgccgacgacgaatgcgacgacgat
gacgacgccgctgacgattcctcctcggcgcaggaggcgatcgatgacgaggatgaagag
ccgcgcctcaagtacaagcgcctgggaggtagtgttccctctcttctctccagcgacacg
gcctcgtgcatcagcgtcgccgagcggatgatcgcgctgggaacgcacggcggcagggtg
catttgctggattaccagggaaaccaggtgaaggaattcgctgctcatactgccactgtg
aacgagctgagcttcgatagcgctggagagttcgtggggagctgcagtgacgatggatcc
gtggtggtgagcagcctgtataccgacagtcacgagaagttccactaccaccggccaatg
aaggccgtcgcgctggatccagactactgcaaaacaaatcgttttgctggcgggggactg
gcagggcatctcattctcaacagcaaaggctggtttggtcccaaagatcaggtgttgcac
tcgggagagggtcccatccatgctgtcaaatggagaacgagccttatcgcgtgggcgaat
gacgagggtgtcaaactgttcgatacagcctcacagcagcgccttacttttattgagaag
ccgaagaacagtccagacgccgagtacttgcgtccccatctagtttggcaggatgatgtg
cacctgttagtcggctggggaaattgcatcaagattgctgccctcagagtgaggggagct
gaccttcctggaggcctcaactccgaaacattctcttttgggaaaaggttcaaccttctg
ccggggacgaagtatgtcgagattgtatcagttttgcaaactgagtactttatttgcggc
ctggctccgtatggaggcgctctcgtggtccttgcttacatcgagagggagggcagcaaa
acggaatcggcaacgggctactctccgaaacagacaggacatgcccaacggcctgaagta
tgcatcttgaactggaaaaacgaagaactggcaacagatgcgctctctatgcatggttat
gaacactacaaggctaaggattacgagcttgctcacgctccattctctggaagtagcacc
gctggtggccagtgggccgctgggtacgagcctttgtactacattgtgtctccaaaggac
gtggttgttgctcgacaaagggatgcggacgaccatgttcaatggcttctcaagcatggg
tggcacgagaaagcactggaagctgtagaagctggaaatgctcgtgtcgagcttctggac
gaggttggtgcgcaatacttagatcacttgatcctggggagggagtacgcgctggcagct
tctttatgtccaaagatcttgcgtggtagtgtttcggcttgggaaagcaggcgggtattt
catttcggccaattgagacagttgcacgttctggccccatacataccagttgtcaatccg
cagcttcgcgatactgtatatgaggttgtccttgatcggttgcttgtaaatccggcgcac
catgagcagttcttggagctagttcgaagctggccccaacacatttattctgtacccacc
attatatctgccgctgagatacaatgcagtaccggcggaaaaactcctttcttactcgag
gcgcttgcgattctttacctttctcagggacagcttgaaaacgtgctgaagctatatctc
gagctgcaaaagcccgcagcgttcgacattatcgaggagcaccatctttatgatgctctt
cacggcaatattgcccttctaatgaagctggattcgaaaagagccattgacttactcgtt
caacaaagggaccgaattagtgcgagcgaggtggtttcctctttagaaaacctgcctcag
aaagagagccgccggcgtctgttacatgactatttgcatactctgttcgaacgagacaca
aatgctggaagaaagtaccatgatttacaggtggaattgtatgctgaatttgaaccacgg
ctattgctgcctttcttgcgtagcagtcagtactacagtcttaataaggcgtacgacgtt
tgcacaaggttaaatcttgtaagggaaaaagtttatttactggggcaaatgggaaatgcg
aaagaagctttagctctgattatcaatgaacttaagagcatgcaagctgctgtggagttt
gtgacatctcgcaacgatgatgatttatggaacgagcttatcaaccagagcttgcgcaat
ccagatatgattggcgcgcttttggatcataccgtgggaaatattgatcccatgcaagtc
ataaacagaattcccaaagacatgccagtgccacgtttgagagaccggctggtaaaggtg
atcacagattacaagacggagacatcgctcaggggcggttgcaataacattctcaaggtg
tgtgtatccgctaacagatag

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