Selaginella moellendorffii: SELMODRAFT_90823
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Entry
SELMODRAFT_90823 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15156
mediator of RNA polymerase II transcription subunit 14
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_90823
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
SELMODRAFT_90823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med14
RM3_Med14
Motif
Other DBs
NCBI-GeneID:
9651258
NCBI-ProteinID:
XP_002968837
JGI:
90823
UniProt:
D8RD42
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MALGQETVPLSLLVKRAAEAAYTGLKEVCEAAPEQSDAERKISLLKFILKTRQRLLRLLV
ICKWCRQIPLVERCQQLMGTLSNHDMSFTQAADSMFYLHESLQQSRAPMYDVASAMDVLF
TGGFPRMPKCIEDLNVQPVLEGWKKDNVLQKLDTLLRSKLLDIAVPKEFTSVSVRDGRLT
LRVDGEFEVELTLGYRGNASLWRVLHLKLLVGESSRPAKFSDMQRFALSDDLERRMSALE
NPFGIIYTVLHEFCAALVMDTLWRQVRALRHGRWKDAIRLDLSFETAASGNPATQAPADA
EADPSKSRVHGVKITYWLDMAKGGESLLPSLRIEPGSDQRISCQHQPPLTDPGTGNDAEF
ALDQSRLDVEKLILRVINCNIHSRLVEVQKSLKANTYIHRVEDDVFLKSSAQDTSDIGED
SLHVRAYGDLYICLSISIRNGRFVLRAPSTLLSLSLVQEMEEAINQGTSVVDVFINLRNQ
SIIHHYTSLGGSMNLKVFEKGAITLKFPEDGPKLGSDVLVLGFPNTGDLYFLAVHLDPAF
MPLFVLLEAQKLAPLPNRTTVAAKHLVIRRYMNIDISKFSLAGNDENLSLLSDNVKSGGR
SLVPKTAEVRNGFDRIDNQVGKLEKAEQQPNFAMGQLQRYHASPSVSLGSPSSRASFGNH
NRKSSSSNNLLALVSQAMGSPARNSFSRMSPSTKLPELEYGRLKSPLLHVDNPASPDLDD
DHLSKLIESISTGGPATDNMASTGLRQVHSSPSSRTVKSASKNSLKSLHLVPRKGLPDGL
GSPLAKDMDRSPYLLPAPSRQLSSLKRKPESDIFSSLPSLQRLSLGARKKQKVEAPSNAL
EVFSGQPYAAVVAAANQGKAPPVTHMAVLLHVVKRSWLVIKHARLTNQMDSLGISYVEEG
RLSSSAGLIFRLATSRMRGDMGKYCNAWQRISLSLGQHGSDGWEVKVRDSHYKSLWSLQK
QKVADWGAGVQLAALSEADAHIKCSQEGLILSYSTVEDDSIKKLLADLERLRSARAFAHC
MKKLLEDRMDEGDQGASRTDTKWEAITRAFKVEALGLTSLWFSYTGSMPGILARFVVEWA
SDQEGCIVHVSPEQLWPHTKYLEDLINGGDVELLLDAIRITAGPLHALAGAIRPARMTAP
VSSIVASAISPPGQVSPPNSSATPQSRATGLSIQIPTITSGPGRGPGPGIVPSSLLPTDI
SVLMRSPYWIRIVYRKQFSVDMRCFEGDQVWLQPAPPPQGAGPDAGGSLPCPQFRPFVME
NVLNSSETVVTGVQQNGPASANPRSNASATRNTPSSAASGRNLVIGGPGYPSYRGELNSA
FCGVSDDGGYSGAWVPLPALKKVLRSTLKYLGVLWLFAQFPNIIREVLGSVMNGRDGTLL
HLDPEQPALRFNIGNCMFAVNMHRHQLYLQGLNVKKFQQPPPELQTDPPGADADLTNGEM
LEITEFFAQRVASEPYDASRLASFVTILTLPIAVLREFLGLISWMKEAQKNQAVEATPRP
RIELCLENRLVINTTMKEEAGSSTSVKSSILHDREREIVEFALTVFLDLGPHVNVNVAGG
AGWLPQCVSVRMRYYYNEGGRRVLLVGLEGSHGGRACWSRGDEWERLKERTKVLEAAAAG
QESSGRLRAVAESVQLTLQSALQQLRAV
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgggcaggagaccgtgcccttgtcgctgctcgtcaagcgcgcggccgaggcc
gcctacaccgggctcaaggaggtctgcgaggcggcgcccgagcaatccgacgccgagagg
aagatcagccttctcaaattcatcctcaagacgcgccagcgcctcctccgccttctcgtc
atctgcaaatggtgtcgccagattcctctcgtggagcgatgccagcagctcatggggacg
ctctccaatcacgacatgagcttcacccaagcggccgattccatgttctacctccacgag
agcttgcagcagtcgcgagcgcccatgtacgatgtcgcctccgccatggacgtgctcttc
accggcggcttcccacgaatgcccaagtgcatcgaggatctcaacgtccagccggttctc
gaggggtggaaaaaggacaacgttcttcaaaagctcgacacccttttgcgatccaagctc
ctggacatcgccgttccaaaggagttcacgtcggtctcggtgcgcgatggccggctcacg
ctgcgcgtggatggagagtttgaggtggagctcactctcggctaccgggggaatgcgtcg
ctgtggagggtgctccatttgaagctgctagtcggggagagctccaggccggcaaagttc
tcggacatgcaacgtttcgcgctctccgacgatctggagcggaggatgtcggctctggaa
aacccgtttgggatcatctacacggttcttcacgagttttgcgccgcgctggtgatggac
acgctttggcgccaagttcgtgcgctgaggcacggaaggtggaaggacgctatacggctg
gatctctcgtttgagacggccgcgtctgggaatccggcgactcaagctcccgctgacgca
gaggcggatccgtccaagtcgcgtgttcatggcgtgaagataacttactggctcgacatg
gccaagggtggtgagagcttgctaccgagcttgaggatcgagccgggtagtgaccagaga
atctcctgccagcaccagccgccactcacggatcctgggactggcaacgacgctgagttt
gcactagatcagagccgcctggacgtcgagaagttgatactccgagtcattaactgcaac
attcactcccggctcgtcgaggtccagaagagtctaaaagccaacacttatattcacagg
gtggaagacgatgtgttcttgaaatcttctgcgcaggatacctcggacatcggtgaagat
agccttcatgtgcgcgcttatggggatctatatatctgtcttagtatcagtatcaggaat
ggacgttttgtacttcgagctccctcaacattactctcattgtctttagttcaagagatg
gaggaggcgataaatcaggggacctcggtcgttgatgtctttatcaatctgcggaatcaa
agtattatccaccactatacatccttgggcggatcaatgaatctgaaggtctttgaaaaa
ggtgccataacgctgaaatttccggaggatggacctaagcttggctcagacgtacttgtt
ctgggatttcccaacaccggcgatttgtacttcctagcagtgcatctcgatccagcattt
atgccactctttgttctattggaagctcaaaagttggcgccgctaccaaatcggacaact
gttgcagcaaagcatctggtcatacgaaggtacatgaacatcgacatcagcaaattttct
ttggctggcaacgatgaaaacttgagcttattaagtgacaacgtaaaaagtggaggcagg
agcttagttcccaagacagctgaagtgaggaatgggtttgacaggatcgacaaccaagta
ggaaaactggaaaaggcggagcaacagccgaacttcgcaatgggacagctgcaacgctat
catgcgtcaccttcagtttcattgggaagtccatccagcagagccagctttggcaaccac
aacagaaaatcgtcatcaagcaataatctgctagcgttggtgtctcaagccatgggaagc
ccagccagaaactcatttagccggatgtctccatcgacaaagttaccggagctggagtat
ggtcgcttaaagtcccctctacttcacgtggataatcccgcctctccggaccttgacgac
gatcatctttcgaagctgatcgagtcgatctcaacgggtggaccagcaacggataacatg
gccagtacaggtttaaggcaggttcattcgtcaccgtcgtcgagaacggtgaagtcggcc
tctaagaattcgttgaagtctctacatcttgtacctcgcaagggcctaccggatgggttg
ggatcacctctggcgaaggatatggatcggtcgccttatcttcttccagccccttcacgt
caactgagttccttgaagcgcaagccagagtcggacattttctcgtctctcccgtcactg
cagcgactaagccttggagcaaggaagaaacagaaagtcgaagcgccatcgaacgccttg
gaagttttctctggacagccttatgctgccgttgttgccgctgcaaatcaagggaaggct
cctccggtgacacatatggccgtacttctgcacgtcgtgaagaggtcctggctggtgata
aagcacgctcgtctaacgaaccagatggattcactcggcatatcgtacgtcgaagaaggc
aggctttcatcatccgcgggactcatattccgtttggcaacttcacgaatgagaggagac
atgggaaagtattgcaatgcttggcagcggatatctttgagcctgggacagcacggcagc
gatggatgggaagtaaaagtccgtgattcgcactataaaagcctgtggagccttcagaag
caaaaggtggcggattggggagctggagttcagctcgcggctttgtcggaggctgatgct
cacatcaaatgtagtcaagaaggcttgattcttagctacagcacggtggaagacgacagt
atcaagaagcttttagcagatctagagcgcttaaggagtgctagagcgtttgcacactgc
atgaagaagcttctggaggacaggatggacgagggagaccaaggagcttcgcggacagat
acgaaatgggaagcaattaccagggctttcaaagtcgaggctttgggccttacgagctta
tggttcagctatacaggaagcatgccaggaatacttgcacgatttgtggtagaatgggca
tccgaccaagagggttgcatagttcatgtctcgccggaacaactgtggccccatacgaag
tatctggaggacttgattaatggaggggacgtggagcttctacttgatgccatccggata
acggctggtcctttacatgcacttgccggcgcaatccgtccagcacgaatgacagcacct
gtttcgagcattgtcgcttctgccatttctccaccaggtcaggtttctcctccaaatagt
tccgccacgcctcagtccagagctacaggactctcgatccagattccaactatcacttcc
ggccccgggagagggcctggtccaggcatagttccaagctccctgttgccaacggacatt
tccgttctcatgcgctcgccatattggatcaggatagtctacagaaagcaattctcggtg
gatatgaggtgctttgaaggtgaccaagtgtggctgcagccagctcctccgcctcagggt
gctggtcccgacgcaggcggttccttaccttgcccgcagtttcggccgttcgtcatggag
aacgttttgaacagttctgagactgtggtcaccggcgtacagcaaaatggtccggcatct
gccaatcctcgctcgaatgcaagtgctactcggaatactccaagctcagcggcatctggt
cggaacctcgtcataggggggcccggttatccaagctacaggggtgagctaaactctgcg
ttttgcggcgtgagtgacgatggaggttacagcggtgcatgggtgcctcttcctgctctc
aaaaaggtcctgcgcagcactcttaagtatctcggtgtcctctggctctttgcgcagttc
cccaatattattcgcgaggtacttggctccgttatgaatgggagagatggaactcttctc
cacttggatcctgagcaacctgctttgcgattcaatatcgggaattgcatgtttgctgtg
aatatgcatcgccaccagctgtatttacaaggtttgaacgtgaagaagtttcagcaaccg
cctcccgagctacaaacagaccccccaggagcagacgcggacctgacaaatggtgaaatg
ctggaaataactgagttcttcgctcaacgagtcgcatctgaaccgtatgatgcctcccgc
ttggcctcgttcgtgacgatcctgacgctaccgatagctgtccttcgggagttccttgga
ttgatatcatggatgaaagaggcccagaagaaccaggccgtggaggccacccctcggccg
aggattgagctgtgcctggagaatcgtttggtgatcaacaccaccatgaaagaggaagct
ggcagcagcacgtccgtgaagagcagcatactgcacgatcgagaaagagaaatcgtggag
ttcgctctgactgttttcttggacctgggtcctcacgtcaacgtgaacgttgctggaggt
gcggggtggctgccgcagtgtgtatcggtgcggatgagatactactacaacgaaggtgga
aggcgggtgcttctggtgggcttggaaggcagtcatgggggcagggcttgctggtccagg
ggtgacgagtgggagaggctgaaagagagaaccaaagtgctggaagctgctgccgccggt
caagagtcaagtgggagattgcgggcagtagcggaatctgtgcaattaactttgcagtct
gcgctccagcagctccgtgcggtgtga
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integrated database retrieval system