Selaginella moellendorffii: SELMODRAFT_92485
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Entry
SELMODRAFT_92485 CDS
T01496
Symbol
SmABCB5
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_92485 (SmABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_92485 (SmABCB5)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_92485 (SmABCB5)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_92485 (SmABCB5)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_92485 (SmABCB5)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_92485 (SmABCB5)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_92485 (SmABCB5)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_92485 (SmABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
DUF87
Zeta_toxin
nSTAND1
AAA_19
Motif
Other DBs
NCBI-GeneID:
9645733
NCBI-ProteinID:
XP_002969904
JGI:
92485
UniProt:
D8RF00
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MEEEKQASIPLHKIFAFADGVDCAFMFGGTIGAVAHGLALPIFLLLFGKLLNSFGSLASD
PQEMYRQVSKYSLYFVYLGIAILFASWAEVALWMQAGERQVSRMRIVYLEAMLKQDISYF
DLEARTGDIVDNLSGNMLTIQEAIGEKMGGFLHFVSTFIGGFVVGFATVWQLGLVTLAIL
PVIAVVGGFYTKAITGIASKGQADTEPGNIVEEMTAQIRTVYSFVGETKALAAYTNALKK
SLKLGYKGGAAKGFGVGGLYGTMFCAWALLLWYGGVLVRKGDATGGSVLSTIFAVLIGGI
SLGQASPSIGALAKARAATQTILKAINHKPTINTSSKGETLSIVEGHVDLQDVHFSYPSR
PDIKVFEGFSLSIPAAKCVAIVGGSGSGKSTVVSLIERFYDPTSGRILVDGHDIRTLDLK
WLRSQIGLVNQEPALFATTIRNNILYGKPSATREEIEDAAKAANAHSFISQLPHGYETQA
GERGVQLSGGQKQRIAIARAILKNPSILLFDEATSALDAESEHVVQDALDKLMHGHTTVI
IAHRLSTIQNADTIAVVQEGKIVELGTHDELSSRGDGGAYATLVHLQNMAREVARDERQS
LKSQAGSTSMRRSSAEHSGLISFSRVRSFISRQSSTKSDGLVEGVELEAQEKKGSYFFRL
LKLNAAEWPFLLLGSAAAVVAGLVNPVFAMIISSVLSIYYNPDKSYMKSEVQKYSIIFVC
IGVSVGMIHSLLHYSFGVTGESLTKRIRELMFTAVTRFEVSWFDRDENGSSQIASKLSTN
AGFVRATMGDRVAIILQNSSLLVSAFLIAFIVEWRIALVVTASLPLLVASGISEQMFLKG
FAGNIEKAHERATKLTGEAVSNIRTVAAFNAEAKMVELVTDELEVPKRSSFVRGQIAGIG
YGVGSFFLFASFGLGLWYAGLVVRDGKASFGNAIKAFLVLVITSNGIGESLGLSPDIVKG
GQALKSVFAILDRKTEINPDDPSAETVKNMKGEIELRSVDFYYPTRPEVTIFKNLNLKVH
IGQSLAIVGASGSGKSSVISLVERFYDPVAGKVLVDGKDIRLLNLRSYRRFVGLVQQEPA
LFATSIQENIRYGKEDATESEIIEAATAANAHNFISALPDGYKTSVGERGAQLSGGQKQR
VAIARAVLKNPTILLLDEATSALDAESEHIVQEALDRLMRGRTTIVVAHRLSTIRNADKI
AVIQDGTIVEQGSHWELVAKADGAYSHLIKLQQQHSPPS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagcaggccagcatccccttgcacaagatcttcgcgtttgccgatggt
gtcgactgtgctttcatgtttgggggaactatcggagctgtggctcacggacttgccctg
ccaatcttcctcctcctcttcgggaagctgctcaacagttttggaagtctggccagcgat
ccacaagaaatgtatcgccaagtatcaaagtactctttgtacttcgtgtatctgggaatc
gctatcttgtttgcctcctgggctgaggtagcgctttggatgcaagctggtgagcgtcaa
gtctccagaatgaggatcgtctacctggaagccatgctcaagcaagacatctcttacttc
gatctcgaggctcgaacaggtgatatcgttgacaatctttcgggcaacatgttaacaatt
caagaggcaattggtgagaagatgggaggattcctacactttgtcagtacatttattgga
ggattcgttgtcggttttgctaccgtttggcagctcggccttgtaactttggccattctt
cccgtgattgctgtagtagggggattctataccaaagctatcacagggattgcgtcaaaa
ggccaggctgatactgagccaggaaacattgtagaagagatgaccgctcaaatacgtaca
gtttactcctttgtcggtgaaacgaaggccctcgctgcttatacaaatgctctcaagaaa
tcattgaagctgggatacaaaggtggagctgccaaaggctttggagttggaggactgtat
ggaaccatgttctgtgcatgggccttgctcctgtggtacggtggagtcctcgtcaggaag
ggagatgccaccggaggctcggttttgtcgacgattttcgccgttcttatcggtggtatt
tccttgggacaggcctctccgagtattggtgctctcgctaaagcgagagcagcgacgcag
acaatcttaaaggcgatcaatcacaagccaactatcaacaccagctcgaaaggcgaaaca
ctatccatagttgaaggacatgtcgacctccaggacgtgcactttagctatccttcacga
ccggatataaaagtctttgaaggcttttctttatcgatcccggcagcaaaatgtgttgcg
atcgttggcggtagtggctcagggaaaagcacggttgtgtcgcttatagagcgcttttat
gatccaacctctgggagaattcttgttgatggtcacgacatcagaactttggatcttaaa
tggctaagatctcaaatcgggcttgtgaatcaggagcctgctttgtttgccacgactata
cgaaacaatatcctttacggtaaaccatcagcaaccagggaagagatcgaggacgccgca
aaagcagcaaacgctcacagctttatctcacaacttccacacggatatgagactcaggct
ggagagagaggtgtccagctctcgggcggtcagaaacaacgtatagcaatcgcgagagcc
atcttgaagaatccctccattcttctcttcgacgaagcaaccagtgctttggacgcagag
tccgagcatgttgtccaggatgctctggacaagctcatgcacggacacacgaccgtgatc
atcgcgcatcgtctctccacgattcaaaacgccgacaccatcgccgtcgtccaagaagga
aagattgtggagcttgggactcatgacgagctgtcctctagaggtgacgggggagcatac
gcgacgttagtacacctccaaaacatggccagagaagttgctcgagacgaaaggcaatct
ctcaagtctcaagctggatcgacctcgatgagaagaagcagtgcagagcatagcggcctg
ataagtttttcaagagtcaggagcttcataagccggcagtcaagcacaaagtcagacgga
ctggtcgaaggtgttgagcttgaagcgcaggagaaaaaaggctcctacttctttagactc
ctgaagctcaacgcagcagaatggccatttcttcttctcggaagcgcagctgcggttgtg
gcggggctcgtaaatccagtgtttgcgatgatcatcagcagcgtcttaagcatctattac
aatccggacaagagctacatgaagtccgaagtgcaaaaatactccatcatcttcgtctgc
ataggcgtcagtgtggggatgatacactccctcttgcactactcgtttggagtaactgga
gagagccttacaaagcgtatccgagaactcatgttcacagccgtcacaagatttgaggtg
agctggttcgatcgtgacgagaacggcagcagtcagattgcctccaagctatcgaccaat
gcgggttttgttagagccaccatgggagatagagttgctattatcctccaaaactcgtca
ctcttggtatcagctttccttatagcgttcattgtggaatggaggatagcacttgtcgtc
accgcttcgctgcctctactcgtcgcctcgggcatctcggagcaaatgttcctcaaaggc
tttgccgggaacattgaaaaggctcacgagcgagctaccaagctaaccggcgaggccgtg
agcaacatacgaacggtggcagcattcaacgccgaggccaagatggtcgagctagttact
gacgaactcgaagtcccgaagaggagtagcttcgttcgaggacagatagcgggaattggc
tatggtgtcggctccttcttcctgttcgcctcgttcggtctcgggctctggtacgccggt
ttggtcgtccgagatggcaaagcaagctttggcaacgccatcaaagccttcctcgtgctg
gttatcacctccaacggtataggggagtcactcggcttaagtccagacattgtgaaaggt
ggccaggctctcaagtcggtgtttgcgattctggacagaaaaacagagattaacccggac
gatcccagtgccgagactgtcaagaacatgaagggagagatcgagcttagaagcgtggac
ttttactatccaacaaggccggaagttaccatcttcaagaacttaaacttgaaggttcac
atcggccagagcctggcgatagttggagctagcgggtccgggaagagctcggtcatctca
ctagtcgagaggttctacgatccagtggcagggaaagttttggtggatggcaaggacatc
aggctcctcaacttacgatcatacaggcgcttcgtcggcctcgtccagcaagaaccggct
ctctttgcgacgtcgatccaggaaaacatccgctacggcaaggaagacgcgacggagagc
gagatcatcgaggcagcaacagcagcaaacgctcacaacttcatcagcgcgctgccggat
ggctacaaaaccagcgtcggcgagcgaggagcgcagctctcgggtggacagaagcaaagg
gtggcgatcgctcgagcagtgctcaagaacccgacgatcctcctgctggacgaggccacc
agcgcgctggatgccgagtcggagcacatcgtccaggaggcgctggacaggttgatgaga
ggccggacgacaatcgtggttgctcatcgcttgtccacgatacgaaacgcggacaagatc
gcggtgatccaggatggaaccatcgtggagcagggaagtcactgggagcttgtcgcgaaa
gccgatggtgcttactcgcatcttataaaattgcagcagcagcacagtcctccgagctag
DBGET
integrated database retrieval system
