KEGG   Selaginella moellendorffii: SELMODRAFT_93109
Entry
SELMODRAFT_93109  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_93109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_93109
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_93109
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SELMODRAFT_93109
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 9632199
NCBI-ProteinID: XP_002970264
JGI: 93109
UniProt: D8RGN9
LinkDB
Position
Unknown
AA seq 209 aa
PGTLAELSQLSRDADFTPGQQVPSTPTSSVPGVIGRKSNTELGAIGDNLSAASSSMAHDS
VYNLQMLEAAYRHLPLPKDSERPRNYTPRNPAITPPSYPQAPAQSIIDNPALWEKFEVDV
LFYAFYYHQGTYQQYLAARELKKHSWRYHKKYNTWFQRHEEPKVTTDEFEQGTYVYFDFH
IVDDIQQGWVQRIKTEFTFEYSFLEDELV
NT seq 630 nt   +upstreamnt  +downstreamnt
ccaggaacgctagcggaacttagccagttgtcgagggatgcagatttcacgccagggcaa
caagtcccgtcaacaccaacatcatcagtacctggtgtgatcggtcggaagagcaacacg
gaacttggagccataggagacaacctctcagctgcaagtagcagtatggctcacgatagt
gtgtacaatttgcagatgctagaagctgcttatcgccaccttccgcttccaaaagactca
gaacggccacgcaactacaccccgaggaacccagctatcactccgcctagctatcctcaa
gcaccagcccaatccatcatcgacaaccctgcgctttgggagaagtttgaggtggacgtc
ctgttctatgcattctactatcatcagggaacgtaccagcagtatctagccgcaagggag
ctaaagaaacattcgtggagatatcacaagaagtacaacacatggttccagcgccacgag
gagccgaaagtcacaacagacgaattcgagcaaggcacatacgtttacttcgacttccac
atcgtggatgatattcagcaaggctgggtccagagaatcaagaccgagtttacattcgaa
tacagcttcctcgaagacgagctggtgtaa

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