Selaginella moellendorffii: SELMODRAFT_94071
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Entry
SELMODRAFT_94071 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_94071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_94071
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SELMODRAFT_94071
mRNA degradation factors
5'-3' decay
Lsm complex
SELMODRAFT_94071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
9633475
NCBI-ProteinID:
XP_002970842
JGI:
94071
UniProt:
D8REH8
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All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MSWAAPDSFHTTSLADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLY
CDLPLGLYIIRGENVVLVGELDQTKKDLPAHMVLVSAAEIKRAQKAEKDATELKGTMRKR
MEFLDLD
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgcgcccgacagcttccacaccacatctctggcagataatctcgacaag
aagcttttggttatcctccgcgacggtcggaagctcgtaggaacgctgcgatcgtttgat
cagtttgctaaccttgtgctagagaaagctgtggagaggatcattgtgggagatctctac
tgtgatcttccacttgggctgtacattatccgcggggaaaatgtggtgcttgttggcgag
ctggaccaaacgaagaaagacttgccggcccacatggttttagtgtcagctgccgaaatc
aaaagagctcaaaaggcggaaaaagatgctacagagctaaagggcacgatgcggaagagg
atggagtttctggacttggactga
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integrated database retrieval system