KEGG   Selaginella moellendorffii: SELMODRAFT_94071
Entry
SELMODRAFT_94071  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_94071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_94071
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_94071
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SELMODRAFT_94071
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 9633475
NCBI-ProteinID: XP_002970842
JGI: 94071
UniProt: D8REH8
LinkDB
Position
Unknown
AA seq 127 aa
MSWAAPDSFHTTSLADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLY
CDLPLGLYIIRGENVVLVGELDQTKKDLPAHMVLVSAAEIKRAQKAEKDATELKGTMRKR
MEFLDLD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcttgggctgcgcccgacagcttccacaccacatctctggcagataatctcgacaag
aagcttttggttatcctccgcgacggtcggaagctcgtaggaacgctgcgatcgtttgat
cagtttgctaaccttgtgctagagaaagctgtggagaggatcattgtgggagatctctac
tgtgatcttccacttgggctgtacattatccgcggggaaaatgtggtgcttgttggcgag
ctggaccaaacgaagaaagacttgccggcccacatggttttagtgtcagctgccgaaatc
aaaagagctcaaaaggcggaaaaagatgctacagagctaaagggcacgatgcggaagagg
atggagtttctggacttggactga

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