Selaginella moellendorffii: SELMODRAFT_94303
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Entry
SELMODRAFT_94303 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_94303
03460 Fanconi anemia pathway
SELMODRAFT_94303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_94303
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_94303
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SELMODRAFT_94303
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Topoisomerases
SELMODRAFT_94303
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
SELMODRAFT_94303
FA (Fanconi anemia) pathway
SELMODRAFT_94303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
PepQ_N
YchJ_M-like
Motif
Other DBs
NCBI-GeneID:
9641341
NCBI-ProteinID:
XP_002970788
JGI:
94303
UniProt:
D8RIM2
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MAVNVLNVAEKPSAAKEIAQILSHGDCRSLSGHSVYNRIFHFNYMIGGQPCRMVMTSVSG
HLMELDFEEQFRKWYYCDPADLFQAPVRRYVPQDKLGIKRTLEEQARNCQWLVLWLDCDR
EGENIAYEVVEVCLNVNRGLNVLRARFSAFIEREIQHAAQNLHRPNRNLSDAVDARQEID
LRIGASFTRFQTMLLKDRFVLPFDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFW
TINCVYRSENDSASFKWTRGHLFDYVAAVSIYEMCVEEPLATVFSVTGRETRKNPPHPLN
TVELVKRASRFLRFGSQETMKAAEELYQQGFISYPRTETDYFSENTDLRRMVEEQTRHPV
WGNYAHRLVDPRENLWRHPSNGGHDDKAHPPIHPTRFSDGEPQWRNDHKAVYELVVRHFL
ACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYRYENWAASTLPNFDLGQQFIP
TRLTLDAGRTQPPPLLSEADLIALMDKEGIGTDATMHDHIKKLLDRRYATKDAQTRFCPT
NLGEALVMGYDTMGYELWKPHLRSIMERDMKAVSDGIKVKENVLETCLQQMKTCFLDRQW
VFSLRGKHVFFGISFYLDRSNRSQNQVPEAVQVGGIVRRCPMCREADMVLKRRPDSKFMV
GCRNFPQCKNVVWLPSVVMEATVTAHTCNSCIPAPVYKIDFKFKRAEIPPQYSIYHTGCV
GGCDIVLNDIMNIYRAPPAPSGSNSVFLARLTETLCRERTSTGSSFWTWPWCCLSKTRPP
WWRCWEIPKPKPAW
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaatgttttgaatgtggcggagaagcccagcgccgccaaggagatcgcgcag
atcttgtcacatggcgattgccggagcttgagcggccattctgtctacaacaggatcttc
catttcaactacatgatcggtggtcagccatgccgaatggtaatgacctctgtcagcggc
catctcatggagctggatttcgaggagcaattccggaaatggtactactgcgatccggcc
gatttgttccaggccccagtgaggagatacgttccccaggacaagctgggaatcaaacgg
acgctggaagaacaggctaggaattgccagtggcttgttctttggctcgattgcgatcga
gaaggagagaacattgcctacgaagtggtggaggtctgtctcaatgttaaccggggactc
aacgtcttacgagctcgcttctcagcatttatcgagagggaaatccagcacgctgcacag
aatttgcaccggccaaatcgcaatctttcggatgctgtggacgcgcgccaggagatcgat
ctacgtataggtgcttccttcactcgctttcagacaatgctcttgaaagatcgctttgtt
cttccatttgacgagcatgagaaggccattcttagctatggtccgtgccagtttccaact
ctaggctttgtcgttgaaagatattggcaagttcaagcacaccagcctgaagatttttgg
accataaactgcgtgtacaggtcggagaacgacagtgcttccttcaaatggacgcgcggc
catcttttcgactatgtagccgccgtctccatatatgaaatgtgcgtggaagagcctctt
gctacggttttctctgttactggacgtgagacacgtaaaaatccaccgcatccactcaat
acggttgagctggtgaagcgggcttcacggtttctacgctttgggtcccaggagacaatg
aaggctgctgaagagctctaccagcaaggattcatcagctatccccggactgagacagat
tacttttcggagaacactgatcttcgacgcatggtagaggagcagacaaggcatcctgtg
tggggaaattatgcccatcgccttgttgaccctcgagagaatttgtggagacatccgagc
aatggtggacacgacgataaagctcatccgcctatacatcctaccaggttttcggatgga
gaaccacaatggaggaacgatcacaaggcagtgtatgagcttgttgtgcgacactttctt
gcgtgtgtctcgcagccggctgtaggatacgcaacaaaagccatgattgacattgctggg
gaacagttctctgctaatggactcatggtgactgctagaaattacttggaagtttataga
tacgaaaactgggctgcttcaactcttccaaactttgatcttggacaacagttcattcca
accaggcttacgctggatgctggcagaacgcaacccccaccccttttgtcagaagcggat
ttaatcgcgctcatggacaaggagggaattggaacggatgctactatgcatgatcacata
aaaaagctgctggaccggcgctacgctaccaaagatgcgcagacacgcttttgtcccaca
aacttgggcgaggcactggttatgggatatgacacgatggggtacgagctttggaagccc
catctcagatctataatggagagagacatgaaggccgtgagcgacgggataaaggtgaag
gagaatgtcctggagacatgcttgcagcaaatgaagacgtgctttctcgataggcaatgg
gtcttttctttgagaggtaagcatgtgttctttggcattagtttctacttggatcggtcc
aacagaagccaaaatcaagtccctgaagcggtgcaagtcggtggaatcgttcgaaggtgc
ccgatgtgtcgtgaagccgacatggttttaaagagaagaccagatagcaagtttatggtt
ggttgtcgcaactttccacagtgtaaaaatgtcgtgtggctaccctccgtcgtcatggaa
gcgacagtcactgcacacacttgcaactcgtgcattccagctccagtttacaaaattgac
ttcaagttcaagagagcagagataccaccacaatacagcatttatcacacaggttgcgtt
ggtggctgtgacattgtgctgaatgacattatgaatatctatagagcacctcctgctccc
tcaggttcgaactctgttttccttgctcggctaacagaaactctatgcagggagaggaca
agcacaggatcgagcttctggacgtggccgtggtgttgcttatccaagacgaggccgccg
tggtggcggtgctgggagatcccaaaacccaagccggcatggtga
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integrated database retrieval system
