Selaginella moellendorffii: SELMODRAFT_95195
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Entry
SELMODRAFT_95195 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00061
Fatty acid biosynthesis
smo00071
Fatty acid degradation
smo01100
Metabolic pathways
smo01212
Fatty acid metabolism
smo04146
Peroxisome
Module
smo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SELMODRAFT_95195
00071 Fatty acid degradation
SELMODRAFT_95195
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SELMODRAFT_95195
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smo01004
]
SELMODRAFT_95195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_95195
Enzymes [BR:
smo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SELMODRAFT_95195
Lipid biosynthesis proteins [BR:
smo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SELMODRAFT_95195
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of breast milk
SELMODRAFT_95195
Exosomal proteins of breast cancer cells
SELMODRAFT_95195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
GH3
Motif
Other DBs
NCBI-GeneID:
9641560
NCBI-ProteinID:
XP_002970967
JGI:
95195
UniProt:
D8RIP9
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
EWRAVPDLWRSCSERYGKRVALVDPRRDPPIRMTYLQVEEAILNFAEAMRSLGVSPDEHV
ALFADNSCRWLIADQGIMAMGAANAVRGSRSSDEELVYILKHSDSVALVIDTPELLKRLE
ARFNDSLSLKFVVLLWGQKPESFAFPVFTYEECISLGQKSREKPGTTSKILWSFDVATIV
YTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEYFTFTRG
IEQVYTSVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALVMGFMAISS
FFKDLKRISEGRSLTRAREHPNRLECFLAGVMAMILSPLHFLGDKIVFSKIRAAIGIRKA
GISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGTVGMPLRETEVKI
VDPESRKTLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDLGWVAPVWKTG
AARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQDQRRLGALIV
ASKDTAATSANDLKSLVREELQRCTSSCSFQIGPFVIVNEPFTMENGLLTPTMKLRRDAI
LTRYRNQIDYLFNKTL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gagtggcgcgccgtcccggatttgtggcgatcgtgctcggagagatatggcaagagggtc
gcgcttgtcgaccctcgtcgcgatcctcccatccggatgacttatctccaggtcgaggag
gccatcctcaactttgcggaagccatgagaagcttgggtgtttcgcccgatgaacacgtt
gctctctttgctgacaactcgtgccgatggctcatcgccgatcaaggaattatggccatg
ggagcagcaaatgccgttcgaggctcaagatcatccgacgaggagctcgtttatattctc
aagcactccgatagcgtagctcttgtcatcgacactcccgagctgctcaagaggctcgag
gcacggtttaacgattctttgtcgcttaagttcgttgtccttctctggggacaaaagcca
gagagcttcgcatttcccgtctttacatacgaggaatgcatttcccttggccagaaaagc
cgagaaaaacctggcacgacaagtaaaatcctctggagcttcgatgttgccaccattgtc
tacacaagtggaacaactggaaacccgaaaggcgtgatgcttacacatgcaaatattatt
caccagatgaagtatttagatcaatgtatccaacccgtaccaggagatagatttctgagc
ttgcttccaccatggcatatgtacgaaagagtagccgagtacttcactttcacgcgtgga
atcgagcaagtttacaccagtgtcaagtttttaaaggacgatttacaagcttatcccact
cagtattttgtctctgtacctcttgtttatgacactctatacagcggtgtccaaaagcag
ctatcgaaagcgtctggcttaaggagagcgctcgtgatgggatttatggcaatcagctca
tttttcaaggatcttaaacggatttccgagggaagatctctcactagagccagggagcat
ccaaacaggcttgaatgctttcttgcaggggtaatggctatgatattgtctcctctacat
tttctcggggataaaattgtattcagcaagatccgagccgcgataggaattcgaaaggca
ggaataagtggaggtggcagtcttcctaagcacgtcgataaattcttcgaggtcgtcggc
atcacactcttgaatggttatggattgacagagtcctctcccgtagtgtcaactcgagct
ttctccgacaatgttctcggaacagttggaatgcctcttcgagaaactgaagtaaaaatt
gtggatcccgaaagcaggaaaaccttggctaatggaaacaaaggaatagtgacggttcgt
ggtccacaagttatgaaaggatactacaagaatcccgatgcaacacaaaaagccatagac
ggtgatggctggcttgacacgggtgatcttggctgggtcgccccagtgtggaaaactggc
gctgctagaaaatgtggaggaatgttagtcttggaggggcgtgcaaaagaaactattgtt
ctctcaacaggtgagaacgtggagccaacagagattgaagaggcagcactgcaaagcagc
cttattgatcaaatcatggttgtcggtcaggaccaaaggcgccttggagcactgatagtt
gcaagcaaggatacagcagccacatctgcaaatgatttgaagagtttggttcgagaagaa
cttcaaagatgtacgtcaagttgttctttccagattgggccctttgtcatcgtgaatgaa
ccattcacaatggagaatgggctattgacaccgacaatgaagcttcgcagggacgccatt
ttaacgcgctaccggaaccaaatcgactacctattcaacaagacattataa
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