Selaginella moellendorffii: SELMODRAFT_95620
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Entry
SELMODRAFT_95620 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_95620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_95620
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SELMODRAFT_95620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
cobW
YdfZ
Zn_ribbon_RanBP
GBP
Vps36-NZF-N
AAA_22
Motif
Other DBs
NCBI-GeneID:
9640201
NCBI-ProteinID:
XP_002971471
JGI:
95620
UniProt:
D8RKD7
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MTTRRKITPTAAQPQLRVRDSSTSAGFISGSLPGTAPQQPIWACPICTYDNLEEHQSCEM
CGVVRDSPAPIHASVPFKFDGPSPDDAILGAVQGSKKPVQGEKLLFFLSPSYVTDSLSLL
PANSHARAKSKAAAPTSDSPGNQSKLSDKEHGVSEKLKKSLVLDGDSEDVKESSKQRLQS
TSNKGLPLESYKPEPWMMHLGSKTAEKSLLNLVVVGHVDAGKSTLMGRILYSLGRVSHKE
MHKNTKEANEMGKGSFAYAWALDEGVEERARGVTITVAVAHFETAKLRVVLLDAPGHKDF
VPNMISGASQADAAVLVVDAAEGGFEAGMGAEGRESGQTREHAQLVRSLGVSQLVVAVNK
MDEVQYSQERFEEIKRILTPFLRHCGFRDSSVSYVPVSAIAGENLVSTPSDELFRAWYTG
KDGTLLDALNRLEPPERDIAKPFRLAVAEVVRSRSLGSAAAGGKVESGAIKIGSKVMVMP
SREVGVVKSLEQDGKALQAARAGDGVDIGLQGVDAGVIVPGGVLCHPDYPVPIATRFELR
ILTLKLAFPMLPGAQVVVHAHHAKEPGTVTNLTALIDAKTGQAVKRSPRCLTSNQSALVE
VAPERGLCVQEYIKFRGLGRVVLRSEGRTLAVGIITRIISYQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgactacgaggaggaagattacgccgacagcagctcagcctcagctccgggtaagagat
tcatcgacgagcgcgggatttatctccggatctcttccaggaacagcgccgcagcaacca
atctgggcttgccccatctgtacatacgataatctggaggaacatcagtcgtgtgagatg
tgtggagtggtgcgagactctccagctccaattcacgcttccgtgcccttcaagtttgac
ggaccttctccagatgatgcaatactcggagcagtacaaggaagcaaaaagcccgtgcaa
ggtgaaaagcttttattttttctctctccatcttatgtgactgactctctttctttgctt
ccagctaacagccatgcaagagcaaagtccaaagcagcagcgcctacttcggattcacct
ggaaaccagagcaagctgagcgacaaggagcacggcgtatccgaaaagctgaaaaagagc
ctggtccttgacggtgatagcgaagacgtcaaagaaagctcaaagcaacggttgcagtct
acgagtaacaaggggttgccgctggaaagctacaagcccgagccatggatgatgcaccta
ggatcaaaaactgcggagaagagcttgttaaaccttgtagtggttggacatgttgatgct
ggcaagtccacattgatgggaagaatcctgtatagcctgggacgagtttctcacaaggaa
atgcacaagaacacaaaggaggctaacgagatgggaaaaggttcttttgcgtacgcttgg
gcgcttgacgagggcgttgaggagagggcacggggtgttactataacggttgccgtggct
cactttgagacagctaaactacgtgtcgtactgttggacgcccccggtcacaaggacttc
gtgcctaacatgatttctggagcttcgcaagctgatgctgctgttcttgttgttgacgcc
gcggaaggtggctttgaagctggaatgggagcagaaggccgcgagagtggccagacaaga
gagcatgctcaattagttcggagccttggagtaagccagcttgttgtagctgtgaacaag
atggatgaggtgcagtattcgcaagagaggtttgaagagatcaagcgcatccttactccg
tttttacgacattgtggatttcgggactcgagcgtgtcctacgttcctgtcagtgcaatc
gctggagagaacctggtctcaactccgagtgatgaattgtttcgagcgtggtacacaggc
aaagacggcacgctccttgacgctctaaacaggcttgagcctccggagagagacatcgcc
aagcctttcagactggctgtagctgaagtcgtaagatcacgttcccttggttctgctgct
gcgggtgggaaagtcgagagtggagccataaaaattgggagcaaggtaatggtaatgcct
tcaagggaggtgggggttgtcaaaagtctagagcaggacgggaaagctctgcaagcagca
agagccggtgatggcgtggatattggtctacagggagttgatgccggtgtgatagtcccc
gggggagttctatgccatcccgattacccggtcccgattgccacgcgtttcgaactgaga
atcctgacactgaaactcgcgttcccgatgcttcccggtgcccaggtggttgtgcatgca
catcatgcaaaggagccaggtactgtcacgaatctgacggctttgatcgatgcaaaaact
ggccaagccgtcaagcggtccccacgttgcttgacgtctaaccaaagcgcgttggtcgag
gtggcaccggagcggggattatgtgttcaagagtatataaagtttcgtggccttggacga
gttgttttgcggagcgaagggcggacactggcggtgggaatcatcacgcggatcatctcc
tatcaatag
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