Selaginella moellendorffii: SELMODRAFT_95875
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Entry
SELMODRAFT_95875 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
smo
Selaginella moellendorffii
Pathway
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_95875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_95875
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
SELMODRAFT_95875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
AEP1
Cbl_N
NEMO
Motif
Other DBs
NCBI-GeneID:
9640074
NCBI-ProteinID:
XP_002971616
JGI:
95875
UniProt:
D8RK05
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MAAADAVTAAEEQDKWLADAMALVQHNAFFMHRALDNNNLRDALKYSAQMLSELRTSKLS
PQKYYELYMKSFDELRKLEFFFKDETKRGRTNADLYELVQHAGNILPRLYLLITVGSVYI
KSKEAPAKDVLKDLVEMSRGVQHPIRGLFLRSYLAQVSRDKLPDVGSEYEGEGGSVNDAV
EFVLQNFTEMNKLWVRMQHQGPAREKEKREKERRQLRDLVGKNLHVLSQLEGVDLAMYRD
VVLPRVLEQVVNCKDEIAQYYLMDCIIQVFPDEFHLQTLESLLGACPQLQTTVDVKTVMA
QLMDRLSNYVASTPDVLPEILQVEAFGKLSTATMKVIDAQPDMPLVGAVSLFVALLTFTL
RVHADRLDYVDQVLGACFKKLEGRGKVKDSKATKQIVALLSAPLEKYNDVVTVLKLTNYP
RVMDHLDYETNKSMAVTIIQFIMKNNTLISSVDKVEALFELLKELIKDSEGNPALDEAKD
FQEEQNLVAKLVHLLKNDDDTEMFKILEAATKHFTEGGSKRLSLTLPSLVFSALKFVRQL
QFRNATDESPVSPKKVFQYLHQTIESLSTVPAPELALRLYLQCAEAASDCDLEPVAYEFF
TQAFMLYEEEIADSKAQITAMHLIIGTLQRTTVFGVENRDTLTHKATGYSAKLLRKPDQC
RAVYACSHLFWNDDGGTQDGERVLLCLKRALRIANAAQQVSSASRGSSGPVTLFVEILNK
YLYYFEKGVPAVASSLVQGLLELIMTETQSEKTSKDAAVDAFFASTMRYIQSQKQKSDAS
GERYGTIQI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggacgctgtcactgcagctgaagagcaggacaaatggctcgcggatgcc
atggctctggtccagcacaatgccttcttcatgcatcgggcgctggataacaacaacttg
agagatgctttgaagtactctgcgcaaatgctatcggagcttcgcacctccaaattgtct
ccacagaagtactacgagctgtatatgaagagttttgacgagcttcggaagctcgagttc
ttcttcaaggacgagacgaaaagaggccgcacgaatgccgatctctacgagcttgttcag
cacgctggcaacatcttaccgaggctgtacctgcttattacagtaggctcggtgtacata
aaatccaaggaagctcccgcaaaggacgtcttgaaggatttggttgaaatgagccgtggt
gtccagcatcccattcgtggtttgttcctgagaagctacttggctcaagtcagtcgtgac
aagctaccagacgttggctccgaatacgaaggggaaggaggtagtgtcaatgatgccgtg
gagtttgtgcttcagaatttcacggaaatgaataagctctgggtccggatgcaacaccag
ggacccgctcgggagaaggaaaagcgagaaaaggagaggagacagctgcgagatttggtt
gggaaaaatcttcacgttctaagtcagcttgaaggtgtagatcttgcaatgtacagggat
gtggtcctcccaagagtgctcgaacaggttgttaattgcaaagacgaaatcgcacagtac
tatttgatggactgtatcatccaagtgttccccgatgagtttcacctgcaaactttagaa
tctcttctaggggcatgcccccagctacagaccactgttgatgtcaagacggtaatggca
caacttatggacaggctttcgaactatgtcgcctctacaccagatgtcctaccggagatt
ttacaagtagaagcttttggcaaactcagtactgctaccatgaaggttatagatgctcaa
cctgacatgccgcttgtaggtgctgttagtctttttgtggctttgttaacctttactttg
agagtacacgctgatcgtctggactatgtcgaccaagttttgggtgcctgctttaagaag
cttgaaggaagggggaaggttaaagacagcaaggctactaaacagattgtggccttgttg
agtgcacctctagagaagtacaatgacgttgtcactgtgttgaagcttacgaattatcca
cgggttatggaccacctggattatgaaacgaacaagagtatggcagtgactattatccag
ttcattatgaaaaacaacacgcttatatcgagtgttgataaggtggaggcactttttgag
cttttaaaagaacttatcaaagacagtgaagggaatcccgcgttagacgaggcaaaagac
tttcaagaggagcaaaaccttgttgctaaactagtacatcttctaaagaacgatgatgac
acagaaatgtttaagattctggaagcagctacaaaacactttacagaaggaggttcaaag
cgtctctctttgactctaccttcactcgtattctcggcattgaagtttgtgagacaatta
caattccgaaatgcaacggacgaaagcccggtttctccaaagaaagttttccaatatctg
catcagacgattgaatcgctatcaacagtgcctgctccggagctggcattacgtttatat
cttcagtgcgcggaggctgccagtgactgtgacttggagcctgttgcctatgagttcttt
acgcaagcgtttatgctttacgaagaagagatcgctgactctaaagcacaaatcacggca
atgcacctgatcatcgggacattgcagagaactactgtctttggggtagaaaacagagac
acgctcactcacaaagctacagggtactcggcgaaattgctaagaaaaccggatcaatgt
cgtgctgtgtatgcttgctcgcatttgttctggaacgacgacggtgggactcaagacggg
gagagggtgctactgtgcttaaagcgagctctcagaatcgccaatgctgctcagcaagtg
tccagtgcaagcaggggaagcagcggaccagtcactctcttcgttgagatactgaacaag
tacctctactacttcgagaaaggcgtcccggcagtagcgagcagccttgtccagggactc
ttggagttgatcatgacggagactcaaagcgagaaaacatccaaagacgcggctgtggat
gctttcttcgcaagcacgatgaggtacatacagtcccagaaacaaaagagcgatgcgtct
ggagagcggtatggtaccattcagatatag
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