Selaginella moellendorffii: SELMODRAFT_96126
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Entry
SELMODRAFT_96126 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_96126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_96126
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_96126
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SELMODRAFT_96126
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SELMODRAFT_96126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Radial_spoke_3
PSD4
Motif
Other DBs
NCBI-GeneID:
9642787
NCBI-ProteinID:
XP_002971614
JGI:
96126
UniProt:
D8RK03
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MAPILKSGDKKSIADGCDPVFVCDFPHQLRAAVAEAAPSHRSGKSIDQCFLRKDRFLFSF
SEARGGMDGGSGLSWMLHRTKIFVWSHLRNQASSECKILNVPPQLCTEGDGQSIDSRHGS
SWLVRIVNRGKESSLVKGRVSASLVLCSQKSLTVVYWPDIFRDTESLPVVAMPDDKLLQI
DDRYGGAPGRRSSSSSYGPQADTKPVKSLIATGLRNLECVAIASCLGNLWRFDCSVSGIS
WRSVNAEIRGKSDNFGPFDFNNTGIVRSLVWWSREELLLLTPRGIECWDVQLVKGGQLSK
AWAYDISEDAEVLKDLTSQKQVWLLDLQVTAEKNLTVLAASLSKDRVTSSSYMQYFMLTF
LCALPSGRRFGECCDPQFRCVKKKAPAQVILPKARVEEEEFLYSMQLRVGGKPAGSAMVL
AGDGTATISHYLHGVGRLYQFDLAWDAGRVLDASVVPSVDDSDEGAWLVLTEKAGVWGIP
ERAVLLGAVEPPERSLSRKGSAKDESVKEQRRRLAVESTDGVGKVLTRNSTQRLLQDEEA
EATVGQLFQHYLTTRQVIAVFEKLQKTGAFDDEGEMNIFARFSKSIVDTIAKHWASGGAG
GAATMAITAQLTEKQKRHQQYLNFLAASKCHEFLRHQRSNSLHTVLEHGEKLAALLKIKD
TYNSRAPGQSGGEAEEAEITGALWDTIQLVGEKARRKNVMLMDKEKMEVFFTRVSDIEEL
FGCIDEHSQAIIGQEMSLKSQTERLCEVADACSSAVRAGIQYRDTQQTWYPSPEGLTAWY
CKATVRSGLWRLATHLMDVQTELDVQSKEKLMVSLADIADVLLEGYAGAILAKIERDEEY
RGLQLEYWSRRDSLLLTLQQHEREASELASQHESMGLKEGRFSNYVFEQFLKKGQYSKLL
RLGEEFAEDLASFLRDKKSLSWLHDFFLKRFTAASDTIHHLALSSSDLNIPIIRDEKPTS
GFTLSARRKLLYLAKLSALAGMSVYDQLVYDSLNSFPLGQEAAAELGIATFTEVLSPLQL
VEACLNSGHKELVLRSLEVFALSGDVFRRGNKSLLEAAWLKLADQDDWLKMRQLSDEECW
NDQQQYEALKATALYAASKYCYGGSAFVVGTPFEETLQLFREIDASSRRAEPGSAGSVNE
VLTEHEDFPEAGEAMVMALRMGKGLELVAEEDNSMEM
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattttgaagagtggagacaagaaatccatcgccgacggctgtgaccctgtc
tttgtgtgcgattttcctcatcagcttagagctgctgttgcggaggcagctccttcacat
cgctcaggcaagtcgatcgatcagtgctttctaagaaaagaccgatttttgttttccttt
tcagaggcgagaggtggaatggatggcggaagtggtctctcttggatgctccacaggacc
aagatcttcgtgtggagccatttgcgcaaccaggcgtcgtcagagtgtaagattctcaac
gtcccaccacagctttgcacggaaggcgatggtcagagtattgattccagacatggaagt
agctggctcgtccggattgtgaatcgtgggaaggagtctagtctcgtgaaaggtcgcgtt
tcagctagcctcgttctatgcagtcagaagagcttgacggtggtttactggccggatatt
ttcagggacacagagagcttgcctgtggtggctatgccggatgacaagcttcttcagata
gatgacagatatggtggagctcccggacggaggtcttcttcgtcgtcgtatggtcctcaa
gcagatacaaagccggtgaagtcactcattgccacaggacttagaaatctggaatgcgta
gccattgccagctgcttggggaacttatggaggttcgactgctccgtgtctgggatttcc
tggcggtctgtaaatgctgagattcgtgggaagagcgacaactttgggcctttcgatttc
aacaacactggcatagtccgctccctggtgtggtggtcacgggaggagcttttactgctg
actcccagggggatcgagtgctgggacgtgcagttagtgaaaggtggtcagctctcaaag
gcctgggcttacgatatctccgaagacgcggaggttttgaaggatctaacgagtcagaaa
caagtgtggcttctcgatttgcaagttactgcggaaaagaacctgaccgtgctagcggca
tctttatccaaggatcgagtcacgagctccagttacatgcagtacttcatgctcactttt
ctgtgtgcactaccttcgggtaggagattcggcgaatgctgtgacccgcagttcagatgc
gtcaagaagaaagctccagcacaagttatcttaccaaaggctcgagtagaggaggaggag
tttctgtattcgatgcagctccgagttggtggaaagcctgccggttcagccatggttctt
gcaggtgatggcaccgcaacgatctctcattacttacacggtgttggtcggctataccag
ttcgatcttgcatgggatgccggcagagttttagacgcttctgtggtaccttcggtggat
gacagcgacgaaggcgcttggcttgttttgactgagaaagcaggagtgtgggggattcct
gaaagagctgtgctgcttggtgctgttgagcctccggaaaggagcctctcgcggaaaggc
agtgctaaagacgagtccgtcaaggagcagaggcgacgattagcagtcgaaagcacggat
ggtgtgggaaaagtcctgacaaggaattctactcaacgtcttctccaagatgaagaagca
gaggcaacagtcggtcagctatttcaacattatctgactactcggcaagtgatcgcggtc
tttgagaagctacagaagaccggagcattcgatgacgaaggcgaaatgaatattttcgct
cgcttcagcaagtcaattgtcgatacaatagccaagcattgggcttcgggtggagctgga
ggtgcagccacgatggccattactgcgcaacttactgagaaacaaaagcgccatcaacag
tatctgaattttctcgcagcttctaaatgtcatgagttccttcggcaccaacgaagtaat
agtctgcacacggttctggagcatggtgagaaacttgctgcgttgctaaagatcaaggac
acgtacaactctcgagctcctggccagagcggtggtgaagcagaagaagctgagattact
ggagctctctgggatacaattcagctagtcggagagaaagctcgcagaaagaatgtgatg
cttatggacaaggaaaagatggaggtgttttttacgcgggtatcagacatagaagagctt
ttcggctgcatcgatgaacacagtcaagctataatcgggcaggagatgtcactgaagtca
caaaccgaacgcttatgcgaggttgccgacgcctgctcctctgctgttagagctggcatt
cagtacagggatacacaacagacatggtatccgtcgccagagggcttgacggcctggtac
tgtaaagcaacagtgcgttccggattatggcgactggcgacccatcttatggacgtccag
acagagcttgacgtccagtcgaaggaaaagctgatggtatctcttgctgatatagccgat
gttcttcttgaaggctatgccggtgccattttggccaagatagagcgcgacgaggagtac
cgaggcttgcaactcgagtactggagcagacgtgatagccttctactgactcttcaacag
catgaaagagaagcatccgaactggcttctcagcatgagagcatgggattgaaggaagga
cgcttcagcaactacgtttttgagcagttcctgaagaaaggccagtactccaagctactg
cgtctgggagaagagtttgcagaagaccttgcgtcctttcttcgggacaagaaatctctt
tcctggctccatgatttcttcctcaagagattcactgctgcgtcggataccatccatcac
ttggctctctcgagcagcgacttgaatatcccgatcattcgggacgaaaaaccgacgtcc
ggttttactctatctgcccgacgaaagcttttatatctggcaaaactgtcggcacttgca
ggtatgtctgtctacgaccaacttgtttacgattccttgaattcttttccactgggacag
gaagctgctgctgagttggggattgcaacttttaccgaagttctgtcaccgctgcagctc
gtcgaagcgtgcctgaacagtggccacaaggaactggttctacgttctctggaggttttc
gcgctgtcgggggacgttttcagaagagggaacaagagccttttggaggccgcatggctg
aagctcgctgatcaagacgactggctgaaaatgaggcagctctcggacgaggaatgctgg
aatgaccaacagcagtacgaagctctcaaggcaactgccctctacgcagcgtcaaagtac
tgttacgggggctcggcgtttgtagttggcacaccgttcgaggagacgctgcaacttttt
cgagagatcgacgccagcagtcgaagggccgagccgggcagtgcaggctcggtgaatgag
gtgctgacggagcacgaggactttccggaagcaggggaagccatggtgatggcgctgagg
atggggaaaggactggagcttgtagctgaggaggacaacagcatggaaatgtga
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integrated database retrieval system
