Selaginella moellendorffii: SELMODRAFT_96490
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Entry
SELMODRAFT_96490 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12184
ESCRT-I complex subunit VPS28
Organism
smo
Selaginella moellendorffii
Pathway
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_96490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_96490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_96490
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
SELMODRAFT_96490
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_96490
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_96490
Exosomal proteins of colorectal cancer cells
SELMODRAFT_96490
Exosomal proteins of bladder cancer cells
SELMODRAFT_96490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
PDZ_CPAF_rel
Motif
Other DBs
NCBI-GeneID:
9640401
NCBI-ProteinID:
XP_002972002
JGI:
96490
UniProt:
D8RLH9
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
MAYPLHPQQQQQHQLQHHQHQQEVKLWSDKREREMFENFADLFAIIKTTEKLEKAYVRDA
MSARDYEPWCTKLIAQFRTLKNALRDVVPDVDRFMAAYKMDCPAAHNRLLVSGIPATVEH
KSATSSSFDAGATAVAVAECVQHYITAMDSLKLNMVAVDQIHPLLLDLLSALNRVPQLTA
DFEGKVKTRDWIAKLNKMGASDELTEQQARQLLFDLDSSYNAFINSLPKHT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacccgctccatccgcagcagcagcagcagcatcagctccagcaccaccagcac
cagcaagaggtgaagctgtggtccgacaagcgcgagcgcgagatgttcgagaacttcgcg
gatctcttcgccatcatcaagacgacggagaagctggagaaggcgtacgtgcgcgacgcg
atgagcgcgcgggactacgagccgtggtgcaccaagctcatcgcgcagttccggacgctc
aagaacgcgctgcgcgacgtggtgcccgacgtggaccgcttcatggccgcctacaagatg
gactgccccgccgcgcacaaccggctgctcgtctcgggcatccccgccacggtggagcac
aagagcgccacctcctcgtccttcgacgccggcgccaccgcggtggcggtggccgagtgc
gtccagcactacatcaccgccatggactcgctcaagctcaacatggtggcggtggatcag
atccacccgctgctgctggacctcctctcggcgctcaaccgggtgccgcagctcaccgcc
gacttcgagggcaaggtgaagacgcgggactggatcgccaagctcaacaagatgggcgcc
tcggacgagctcacggagcagcaggcgcggcagctcctcttcgatctcgactcctcgtac
aacgcgttcatcaactcgctgcccaagcatacgtga
DBGET
integrated database retrieval system
