Selaginella moellendorffii: SELMODRAFT_96714
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Entry
SELMODRAFT_96714 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00100
Steroid biosynthesis
smo00909
Sesquiterpenoid and triterpenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
SELMODRAFT_96714
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
SELMODRAFT_96714
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smo01006
]
SELMODRAFT_96714
Enzymes [BR:
smo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
SELMODRAFT_96714
Prenyltransferases [BR:
smo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
SELMODRAFT_96714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
9640595
NCBI-ProteinID:
XP_002971951
JGI:
96714
UniProt:
D8RL70
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MGMVEALIRHPGELPALLQMKLAAARAAHAFPADPHMAYCYRILLLVSRSFAVVVQHLNQ
EIRDAVCIFYVVLRALDTVEDDMSIPVETKTTVLEEFYKHLEDPSWRFVCKWNFYIVLMK
NFNHLSLAFLQLSKEYQCVISDITKRMGYGMAEFIRKEVVVTVSDYDKYCYYVAGLVGVG
LSHLFNSSRLEDLDQRLIEPDNDQSLVPEYPAISMGRFLQKVNIIRDYLEDINELPAPRM
FWPREIWGKYAPTSLLSDFRDESNEKEAVECLNDMITDCLRHAPECLFYMSKLKNPSVFR
FCAVPQVMAIATAAVCYNNPQVFRGVVKIRRGTTAKIIVTTNNMADVCGAFYDFASILAS
KINKNDPSALIAAERVENIFKACRQYGLSSSR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggggatggtggaggcgctgatccggcatcccggcgagctgccggcgctcttgcagatg
aagctcgcagctgcgcgcgctgctcatgcattcccggcggatccacacatggcctactgc
taccggatcttgctgctcgtctccaggagcttcgcggttgtcgtccagcacctgaatcag
gagattcgcgatgcggtgtgcattttctatgtggtgttacgtgcgctggatactgttgag
gatgatatgagcattcccgtggaaacgaagactactgtgctggaggaattctacaaacac
ttggaggatccatcttggcgattcgtttgtaagtggaatttttatattgttctcatgaag
aacttcaatcacctgtctcttgcgtttcttcagctgtccaaggaataccagtgtgttatc
agcgatattacgaaaaggatgggatatgggatggctgagtttattcggaaagaggtagtc
gttacagtatcggattatgacaagtactgctattatgtggcgggtttagttggagttggc
ttgtcacatcttttcaactcttcacgacttgaagacctggatcagagacttatagaacct
gataatgaccaatcattagttcccgagtaccctgcaatttcaatgggccgattcttgcag
aaagtcaacataataagagattacctggaagacatcaacgagcttccagcccctcgtatg
ttttggccccgtgaaatctggggaaagtatgctccgacttctctcctttcggactttaga
gacgagagcaacgagaaggaagctgttgaatgcctaaacgacatgattaccgactgcctt
agacacgcgccagagtgtcttttctacatgtccaagcttaaaaatccttcagtgtttcgg
ttttgcgctgtgccacaggtcatggctatagctactgcggcagtgtgctacaataatcct
caagtttttagaggggttgtgaagatacggcgtgggacaaccgcgaaaataatagtgaca
acgaataacatggctgacgtctgtggagcattttatgacttcgcgagtattctggcgtca
aagataaataagaacgatccgtcggctttgatcgctgccgaacgtgtagagaatatattc
aaggcttgtcgacagtatggcttgtcatccagcaggtaa
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