Selaginella moellendorffii: SELMODRAFT_96881
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Entry
SELMODRAFT_96881 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00061
Fatty acid biosynthesis
smo00071
Fatty acid degradation
smo01100
Metabolic pathways
smo01212
Fatty acid metabolism
smo04146
Peroxisome
Module
smo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SELMODRAFT_96881
00071 Fatty acid degradation
SELMODRAFT_96881
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SELMODRAFT_96881
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smo01004
]
SELMODRAFT_96881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_96881
Enzymes [BR:
smo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SELMODRAFT_96881
Lipid biosynthesis proteins [BR:
smo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SELMODRAFT_96881
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of breast milk
SELMODRAFT_96881
Exosomal proteins of breast cancer cells
SELMODRAFT_96881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9640473
NCBI-ProteinID:
XP_002972095
JGI:
96881
UniProt:
D8RLZ2
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MPGDLFRSPVIIAIVVAVLIPLVATIFSYNKKPKLRSVEVKVGGEAGHTRRNHRFLSLIE
TPWEGANTLAALFEQACSKYPKRPLLGSRTLIKSETEVSKDGKKFEKVTFGDYVWITFDQ
AFQRAQNIASGLVALGHDKEEKIAIFAETRPEWLIALQACFRQNFTVVTIYASLGEEALA
HSLNETEATTVICDVKQLQKIIGMSSHLKTVKRVVCMDEENQRLDTNLPGNTNWNVSSFS
QLEKLGRDTPSEPRLPAPEDLAVIMYTSGSTGMPKGVMISHANIVSTVAGVMTAVPELNH
NDVYIAYLPLAHILELAAEVTMLAVGASIGYGSPLTLTDISNKIKKGTKGDVSVLRPTLM
TAVPAILDRIRDGVRKTVDAKGGAAKKLFDLAYRRRLAAIEGSWFGAWGLEKLFWDALVF
KKIRGVLGGRVRGLLSGGAPLSADTQRFINICFGIPIGQGYGLTETCAGATFSEWDDISV
GRVGPPVPHCYIKLVNWSSGGYLVTDKPMPRGEIVIGGPSVTLGYFKNQGKTDEDYKVDE
RGMRWFYTGDIGQFHPDGCLEIVDRKKDIVKLQHGEYVSLGKVEAALSVSPMVDSIMVHA
DPFHSYCVALVVPSQSYLEKWAKQSNVQYGNFGELCKKKEAEKQILQSMAQVGKEAKLER
VEIPAKVKLLPEAWTPETGLVTAALKLKRENIRKTFADELKQLYE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagatcttttccgttccccggtgatcatcgccatcgttgttgcggtgctgatt
cctctcgttgcgacgatcttttcgtacaacaaaaagccgaagttgcgcagtgtggaagtg
aaagtcgggggtgaagctggccacactcgccggaatcacaggtttttgagtttgatcgag
acgccgtgggaaggagcaaacacacttgcagcactctttgagcaggcttgctctaagtac
ccaaagaggccgctgctgggatccagaactttgatcaagtccgagactgaagttagcaaa
gacggcaagaaattcgagaaagtgacttttggggattatgtctggatcactttcgatcaa
gcttttcaacgagcacagaacattgcatcagggctggtggcgcttggacatgacaaagaa
gaaaagattgcaatctttgcggaaactcgacccgagtggctcattgcgctgcaggcctgc
ttccggcaaaattttactgttgtcacaatatacgcatcactgggtgaggaggcccttgct
cactcgctcaatgagacagaggcgacgactgtgatctgcgacgtcaagcagctgcaaaaa
ataattgggatgagcagccacttgaagactgtaaagcgtgtcgtgtgcatggatgaggaa
aaccagcgcttggacacaaatcttcccgggaacacgaactggaatgtgtcatctttttca
cagctggagaaattgggacgtgacacgccaagcgagcctcgtttgccggcacctgaggat
cttgctgttatcatgtatacgagcggcagtacgggtatgcccaagggtgtgatgatttcg
catgcaaatatcgtgtcaactgttgctggtgttatgactgctgtaccggaactcaatcac
aatgatgtctacattgcttatctcccacttgcccacattttggaactcgctgcggaagtg
accatgctggcggttggagcttccattggttatggctcaccgctgacgttaaccgatata
tctaacaagataaagaagggaacaaagggtgatgtaagcgtgttaaggccgacgctgatg
actgcagtccctgcaattcttgatcgtatccgagatggagtcagaaaaacggttgatgca
aagggcggtgctgccaaaaagcttttcgaccttgcctatcgacgacgcctggcagctatt
gaaggcagctggtttggtgcgtggggattggaaaagcttttctgggatgctctggtgttc
aagaagattcgcggtgtacttggtggaagagttcgcggattgttatcaggtggtgcccct
ctctctgccgatactcaacggtttataaatatttgtttcgggataccaattggacagggt
tatggtcttacggagacctgtgccggtgcaacattttctgaatgggatgatattagcgtt
ggccgtgtcggcccaccagtcccacattgctatatcaagctcgtgaactggtcgtctgga
ggatacttggtgactgataaacccatgcctagaggagaaattgtcattggcggccccagt
gttacattgggatacttcaagaaccaggggaagacggatgaagattacaaggttgacgag
aggggcatgagatggttctacactggtgacattggacagttccatcccgatggttgcctg
gaaattgtagaccggaagaaggacattgttaagcttcaacatggcgaatacgtatcgctg
ggcaaggtcgaggcagcattatcggttagcccgatggtggacagcatcatggtgcatgct
gatcctttccacagctactgcgttgcgctggttgtaccatcgcagagttatctggagaag
tgggcgaagcagtcgaacgtgcagtatgggaacttcggggagctgtgcaagaagaaagag
gcggagaagcagatactccaatccatggcgcaggtgggcaaggaagcgaagttggagagg
gttgagattccagcgaaagtgaagctgctgccagaggcgtggacgcccgagaccggcctc
gtcacggccgcgttgaagctcaagcgggagaacatccggaaaacgttcgccgatgagctc
aagcagctatacgagtaa
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integrated database retrieval system
